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Namespace Members

Index of 296 namespace-level symbols (functions, typedefs, enums, variables) across all public namespaces.

  • _fiff_block_explanations [var] in FIFFLIB
  • _fiff_explanations [var] in FIFFLIB
  • _fiff_unit_explanations [var] in FIFFLIB
  • _fiff_unit_mul_explanations [var] in FIFFLIB
  • Accuracy [enum] in INVLIB
  • addReferenceChannels [fn] in UTILSLIB — Add reference channel(s) back as zero-filled rows.
  • allowedDatatypes [fn] in BIDSLIB — All allowed BIDS datatypes.
  • allowedElectrophysiologyDatatypes [fn] in BIDSLIB — All allowed BIDS electrophysiology datatypes.
  • annotateAmplitude [fn] in UTILSLIB — Annotate segments where amplitude exceeds thresholds or is too flat.
  • annotateMusclZscore [fn] in UTILSLIB — Detect muscle artifacts via high-frequency z-score and annotate bad segments.
  • annotationsFromEvents [fn] in FIFFLIB — Convert a FIFF event matrix to FiffAnnotations.
  • applyInverseEpochs [fn] in INVLIB — Apply inverse operator to each epoch in a list.
  • applyInverseRaw [fn] in INVLIB — Apply inverse operator to raw data in blocks.
  • AvrTypeRowVector [type] in DISPLIB
  • AvrTypeRowVectorPair [type] in DISPLIB
  • BeamformerInversion [enum] in INVLIB — Method for inverting the beamformer denominator matrix G^H Cm^{-1} G.
  • BeamformerPickOri [enum] in INVLIB — Orientation picking mode for beamformer filters.
  • BeamformerWeightNorm [enum] in INVLIB — Weight normalization strategy for beamformer spatial filters.
  • BIDS_DATATYPE_ANAT [var] in BIDSLIB
  • BIDS_DATATYPE_BEH [var] in BIDSLIB
  • BIDS_DATATYPE_DWI [var] in BIDSLIB
  • BIDS_DATATYPE_EEG [var] in BIDSLIB
  • BIDS_DATATYPE_FUNC [var] in BIDSLIB
  • BIDS_DATATYPE_IEEG [var] in BIDSLIB
  • BIDS_DATATYPE_MEG [var] in BIDSLIB — BIDS datatype strings used in directory and filename construction.
  • BIDS_DATATYPE_PERF [var] in BIDSLIB
  • bidsCoordToFiffFrame [fn] in BIDSLIB — Maps BIDS coordinate system names to FIFF coordinate frame constants.
  • bidsEntityOrder [fn] in BIDSLIB — Entity key ordering for BIDS filenames (per specification).
  • BidsTsvRow [type] in BIDSLIB — Represents a single row of a BIDS TSV file as a column-name → value map.
  • bidsTypeToFiffKind [fn] in BIDSLIB — Maps BIDS channel type strings back to FIFF channel kind constants.
  • BIG_TIME [var] in INVLIB
  • buildDateTime [fn] in BIDSLIB — Returns build date and time.
  • buildDateTime [fn] in COMLIB — Compile-time date/time stamp baked into the COMLIB binary.
  • buildDateTime [fn] in CONNECTIVITYLIB — Returns build date and time.
  • buildDateTime [fn] in DECODINGLIB — Returns build date and time.
  • buildDateTime [fn] in DISP3DLIB — Returns build date and time.
  • buildDateTime [fn] in DISPLIB — Returns build date and time.
  • buildDateTime [fn] in DSPLIB — Returns build date and time.
  • buildDateTime [fn] in FIFFLIB — Returns build date and time.
  • buildDateTime [fn] in FSLIB — Returns build date and time.
  • buildDateTime [fn] in FWDLIB — Returns build date and time.
  • buildDateTime [fn] in INVLIB — Returns build date and time.
  • buildDateTime [fn] in LSLLIB — Returns build date and time.
  • buildDateTime [fn] in MATHLIB — Returns build date and time.
  • buildDateTime [fn] in MLLIB — Returns build date and time.
  • buildDateTime [fn] in MNALIB — Returns build date and time.
  • buildDateTime [fn] in MNELIB — Returns build date and time.
  • buildDateTime [fn] in MRILIB — Returns the build date and time.
  • buildDateTime [fn] in STSLIB — Returns build date and time.
  • buildDateTime [fn] in UTILSLIB — Returns build date and time.
  • buildHash [fn] in BIDSLIB — Returns abbreviated build git hash.
  • buildHash [fn] in COMLIB — Abbreviated git commit hash (typically 7 hex chars) of the source tree this library was built from.
  • buildHash [fn] in CONNECTIVITYLIB — Returns abbreviated build git hash.
  • buildHash [fn] in DECODINGLIB — Returns abbreviated build git hash.
  • buildHash [fn] in DISP3DLIB — Returns abbreviated build git hash.
  • buildHash [fn] in DISPLIB — Returns abbreviated build git hash.
  • buildHash [fn] in DSPLIB — Returns abbreviated build git hash.
  • buildHash [fn] in FIFFLIB — Returns abbreviated build git hash.
  • buildHash [fn] in FSLIB — Returns abbreviated build git hash.
  • buildHash [fn] in FWDLIB — Returns abbreviated build git hash.
  • buildHash [fn] in INVLIB — Returns abbreviated build git hash.
  • buildHash [fn] in LSLLIB — Returns abbreviated build git hash.
  • buildHash [fn] in MATHLIB — Returns abbreviated build git hash.
  • buildHash [fn] in MLLIB — Returns abbreviated build git hash.
  • buildHash [fn] in MNALIB — Returns abbreviated build git hash.
  • buildHash [fn] in MNELIB — Returns abbreviated build git hash.
  • buildHash [fn] in MRILIB — Returns the short git hash.
  • buildHash [fn] in STSLIB — Returns abbreviated build git hash.
  • buildHash [fn] in UTILSLIB — Returns abbreviated build git hash.
  • buildHashLong [fn] in BIDSLIB — Returns full build git hash.
  • buildHashLong [fn] in COMLIB — Full-length git commit hash (40 hex chars) of the source tree this library was built from.
  • buildHashLong [fn] in CONNECTIVITYLIB — Returns full build git hash.
  • buildHashLong [fn] in DECODINGLIB — Returns full build git hash.
  • buildHashLong [fn] in DISP3DLIB — Returns full build git hash.
  • buildHashLong [fn] in DISPLIB — Returns full build git hash.
  • buildHashLong [fn] in DSPLIB — Returns full build git hash.
  • buildHashLong [fn] in FIFFLIB — Returns full build git hash.
  • buildHashLong [fn] in FSLIB — Returns full build git hash.
  • buildHashLong [fn] in FWDLIB — Returns full build git hash.
  • buildHashLong [fn] in INVLIB — Returns full build git hash.
  • buildHashLong [fn] in LSLLIB — Returns full build git hash.
  • buildHashLong [fn] in MATHLIB — Returns full build git hash.
  • buildHashLong [fn] in MLLIB — Returns full build git hash.
  • buildHashLong [fn] in MNALIB — Returns full build git hash.
  • buildHashLong [fn] in MNELIB — Returns full build git hash.
  • buildHashLong [fn] in MRILIB — Returns the long git hash.
  • buildHashLong [fn] in STSLIB — Returns full build git hash.
  • buildHashLong [fn] in UTILSLIB — Returns full build git hash.
  • BVBinaryFormat [enum] in BIDSLIB — Binary format enumeration for BrainVision data files.
  • BVOrientation [enum] in BIDSLIB — Data orientation enumeration.
  • ChannelFormat [enum] in LSLLIB — Data format of a channel (mirroring the values used in the original LSL protocol).
  • CircularBuffer_char [type] in UTILSLIB — Defines CircularBuffer of char type.
  • CircularBuffer_double [type] in UTILSLIB — Defines CircularBuffer of double type.
  • CircularBuffer_int [type] in UTILSLIB — Defines CircularBuffer of integer type.
  • CircularBuffer_Matrix_double [type] in UTILSLIB — Defines CircularBuffer of Eigen::MatrixXd type.
  • CircularBuffer_Matrix_float [type] in UTILSLIB — Defines CircularBuffer of Eigen::MatrixXf type.
  • CircularBuffer_pair_double_double [type] in UTILSLIB — Defines CircularBuffer of double Pair type.
  • CircularBuffer_pair_int_int [type] in UTILSLIB — Defines CircularBuffer of integer Pair type.
  • CircularBuffer_short [type] in UTILSLIB — Defines CircularBuffer of short type.
  • ColorMaps [enum] in DISPLIB
  • computeBridgedElectrodes [fn] in UTILSLIB — Detect bridged EEG electrodes.
  • computeElectricalDistance [fn] in UTILSLIB — Compute electrical distance matrix between EEG channels.
  • computeFilteredAverage [fn] in RTPROCESSINGLIB — Computes the filtered average for given fiff raw data.
  • computeLofScores [fn] in UTILSLIB — Compute LOF scores for a feature matrix.
  • computeSourceBandPower [fn] in INVLIB — Compute band power for source estimate.
  • computeSourcePsd [fn] in INVLIB — Compute PSD for a source estimate using Welch's method.
  • computeWhitener [fn] in INVLIB — Compute whitening matrix from a noise covariance.
  • COR_HEIGHT [var] in MRILIB — Height of each COR slice in pixels.
  • COR_NSLICE [var] in MRILIB — Number of COR slices.
  • COR_PIXEL_SIZE [var] in MRILIB — Pixel size for COR slices (1mm in meters).
  • COR_WIDTH [var] in MRILIB — Width of each COR slice in pixels.
  • countAnnotations [fn] in FIFFLIB — Count annotations by description.
  • dateTimeNow [fn] in UTILSLIB — Returns build date and time (time preprocessor was run).
  • dateToday [fn] in UTILSLIB — Returns build date (time preprocessor was run).
  • defaultCov [var] in MNELIB
  • defaultD [var] in MNELIB
  • defaultInfo [var] in MNELIB
  • defaultTris [fn] in FSLIB
  • defaultVariant [var] in COMLIB
  • detectTriggerFlanksGrad [fn] in RTPROCESSINGLIB — detectTriggerFlanksGrad detects flanks from a given data matrix in row wise order.
  • detectTriggerFlanksGrad [fn] in RTPROCESSINGLIB — detectTriggerFlanksGrad detects flanks from a given data matrix in row wise order.
  • detectTriggerFlanksMax [fn] in RTPROCESSINGLIB — detectTriggerFlanks detects flanks from a given data matrix in row wise order.
  • detectTriggerFlanksMax [fn] in RTPROCESSINGLIB — detectTriggerFlanks detects flanks from a given data matrix in row wise order.
  • DetrendMode [enum] in DISPLIB — Channel display metadata (read-only from the renderer's perspective).
  • dipoleFitFuncs [type] in INVLIB — Pointer alias for dipoleFitFuncsRec, used throughout the dipole fitting module.
  • discard3DPointOutliers [fn] in MNELIB — Discard outliers compared to a given 3D surface.
  • eegAllowedExtensions [fn] in BIDSLIB — Supported raw data file extensions for EEG in BIDS.
  • ElectrodeLayout [enum] in DISP3DLIB — Geometry layout for an electrode array.
  • estimateSnr [fn] in INVLIB — Estimate SNR from evoked data and inverse operator.
  • eventsFromAnnotations [fn] in FIFFLIB — Convert FiffAnnotations to a FIFF event matrix.
  • FiducialId [enum] in UTILSLIB — Identifier for the three cardinal fiducials.
  • FieldMap [type] in DISP3DLIB
  • fiffDataRef [type] in FIFFLIB — Backward-compatible pointer typedef for the old fiffDataRef pointer.
  • fiffDataRefRec [type] in FIFFLIB — Backward-compatible typedef for the old fiffDataRefRec struct.
  • fiffFrameToBidsCoord [fn] in BIDSLIB — Maps FIFF coordinate frame constants to BIDS coordinate system names.
  • fiffKindToBidsType [fn] in BIDSLIB — Maps FIFF channel kind constants to BIDS channel type strings.
  • filterChannel [fn] in RTPROCESSINGLIB — This function is used to filter row-wise in parallel threads.
  • filterChpi [fn] in UTILSLIB — Remove cHPI excitation signals from MEG data by notch filtering.
  • filterChpi [fn] in UTILSLIB — Overload that attempts to extract cHPI frequencies from FiffInfo.
  • filterData [fn] in RTPROCESSINGLIB — Creates a user designed filter kernel and filters the raw input data.
  • filterData [fn] in RTPROCESSINGLIB — Calculates the filtered version of the raw input data based on a given list filters.
  • filterDataBlock [fn] in RTPROCESSINGLIB — Calculates the filtered version of the raw input data block.
  • filterFile [fn] in RTPROCESSINGLIB — Creates a user designed filter kernel, filters data from an input file and writes the filtered data to a pIODevice.
  • filterFile [fn] in RTPROCESSINGLIB — Filters data from an input file based on an existing filter kernel and writes the filtered data to a pIODevice.
  • findBadChannelsLof [fn] in UTILSLIB — Detect bad channels using Local Outlier Factor (LOF).
  • findBadChannelsMaxwell [fn] in UTILSLIB — Detect bad MEG channels using SSS reconstruction residuals.
  • fitMatchedPoints [fn] in MNELIB — Corresponding point set registration using quaternions.
  • fitUser [type] in FWDLIB
  • fitUser [type] in UTILSLIB
  • fixStimArtifact [fn] in UTILSLIB — Repair stimulus artifacts by interpolating or zeroing data around events.
  • fromTokens [fn] in INVLIB — Reconstruct an InvSourceEstimate from a token sequence.
  • FWD_BEM_CONSTANT_COLL [var] in FWDLIB
  • FWD_BEM_IP_APPROACH_LIMIT [var] in FWDLIB
  • FWD_BEM_LIN_FIELD_FERGUSON [var] in FWDLIB
  • FWD_BEM_LIN_FIELD_SIMPLE [var] in FWDLIB
  • FWD_BEM_LIN_FIELD_URANKAR [var] in FWDLIB
  • FWD_BEM_LINEAR_COLL [var] in FWDLIB
  • FWD_BEM_UNKNOWN [var] in FWDLIB
  • FWD_COIL_ACCURACY_ACCURATE [var] in FWDLIB
  • FWD_COIL_ACCURACY_NORMAL [var] in FWDLIB
  • FWD_COIL_ACCURACY_POINT [var] in FWDLIB
  • FWD_COIL_UNKNOWN [var] in FWDLIB
  • FWD_COILC_AXIAL_GRAD [var] in FWDLIB
  • FWD_COILC_AXIAL_GRAD2 [var] in FWDLIB
  • FWD_COILC_EEG [var] in FWDLIB
  • FWD_COILC_MAG [var] in FWDLIB
  • FWD_COILC_PLANAR_GRAD [var] in FWDLIB
  • FWD_COILC_UNKNOWN [var] in FWDLIB
  • FWD_IS_MEG_COIL [fn] in FWDLIB
  • getDefaultScalingValue [fn] in DISPLIB — Get the default scaling values by channel type.
  • getScalingValue [fn] in DISPLIB — Get the scaling value from suplied scale map, and check if there is a float asigned to the scale.
  • gitHash [fn] in UTILSLIB — Returns short version of the hash of the current git commit.
  • gitHashLong [fn] in UTILSLIB — Returns entire hash of the current git commit.
  • IcaComponentLabel [enum] in DECODINGLIB — Categorical label assigned to a single ICA component.
  • ieegAllowedCoordSystems [fn] in BIDSLIB — Allowed coordinate systems for iEEG electrodes (BIDS-iEEG spec).
  • ieegAllowedExtensions [fn] in BIDSLIB — Supported raw data file extensions for iEEG in BIDS.
  • InvEstimateMethod [enum] in INVLIB — Enumerates the inverse estimation method that produced a source estimate.
  • InvOrientationType [enum] in INVLIB — Enumerates the orientation constraint used during source estimation.
  • InvSourceSpaceType [enum] in INVLIB — Enumerates the source space type underlying a source estimate.
  • InvTokenId [enum] in INVLIB — Token vocabulary for the InvSourceEstimate tokenization format.
  • isHit [fn] in DISP3DLIB
  • kBemHead [var] in SURFACEKEYS
  • kBemPrefix [var] in SURFACEKEYS
  • kContourEeg [var] in SURFACEKEYS
  • kContourMeg [var] in SURFACEKEYS
  • kDigCardinal [var] in SURFACEKEYS
  • kDigEeg [var] in SURFACEKEYS
  • kDigExtra [var] in SURFACEKEYS
  • kDigHpi [var] in SURFACEKEYS
  • kDigPrefix [var] in SURFACEKEYS
  • kHelmet [var] in SURFACEKEYS
  • kLhInflated [var] in SURFACEKEYS
  • kLhPrefix [var] in SURFACEKEYS
  • KMeansDistance [enum] in UTILSLIB — Distance metric for K-Means clustering.
  • KMeansEmptyAction [enum] in UTILSLIB — Action to take when a K-Means cluster becomes empty.
  • KMeansStart [enum] in UTILSLIB — Initialization strategy for K-Means clustering.
  • kRhInflated [var] in SURFACEKEYS
  • kRhPrefix [var] in SURFACEKEYS
  • kSensDig [var] in SURFACEKEYS
  • kSensEeg [var] in SURFACEKEYS
  • kSensMeg [var] in SURFACEKEYS
  • kSensMegGrad [var] in SURFACEKEYS
  • kSensMegMag [var] in SURFACEKEYS
  • kSensPrefix [var] in SURFACEKEYS
  • kSrcSpPrefix [var] in SURFACEKEYS
  • m_matViridrisData [var] in DISPLIB
  • makeSpharaProjector [fn] in UTILSLIB — Constructs a SPHARA operator.
  • MatrixXdR [type] in DISPLIB
  • MGH_TAG_MGH_XFORM [var] in MRILIB — MGH Talairach transform tag (contains path to .xfm file).
  • MGH_TAG_OLD_MGH_XFORM [var] in MRILIB — Old MGH transform tag.
  • MGH_TAG_OLD_SURF_GEOM [var] in MRILIB — Old surface geometry tag.
  • MlBackend [enum] in MLLIB — Available ML back-end engines.
  • MlDataType [enum] in MLLIB — Supported data types for tensors.
  • MlTaskType [enum] in MLLIB — ML task categories.
  • MnaContainerFormat [enum] in MNALIB — Supported container formats.
  • MnaDataKind [enum] in MNALIB — Describes the kind of data flowing through a graph port.
  • mnaDataKindFromString [fn] in MNALIB — Convert a string to MnaDataKind.
  • mnaDataKindToString [fn] in MNALIB — Convert MnaDataKind to its string representation.
  • MnaFileRole [enum] in MNALIB — Describes the role a file plays within an MNA project.
  • mnaFileRoleFromString [fn] in MNALIB — Convert a string to MnaFileRole.
  • mnaFileRoleToString [fn] in MNALIB — Convert MnaFileRole to its string representation.
  • MnaNodeExecMode [enum] in MNALIB — Execution mode for a graph node.
  • MnaPortDir [enum] in MNALIB — Direction of a port on a graph node.
  • mneChSelection [type] in MNELIB
  • mneChSelectionRec [type] in MNELIB — Backward-compatible typedef aliases.
  • mneLayoutPort [type] in MNELIB
  • mneLayoutPortRec [type] in MNELIB — Backward-compatible typedef aliases.
  • mneUserFreeFunc [type] in MNELIB — Generic destructor callback for user-attached data.
  • MRI_ALL_FRAMES [var] in MRILIB — Load all frames.
  • MRI_BITMAP [var] in MRILIB — Bitmap (unused in practice).
  • MRI_FLOAT [var] in MRILIB — 32-bit float.
  • MRI_INT [var] in MRILIB — Signed 32-bit integer.
  • MRI_LONG [var] in MRILIB — Long integer (unused in practice).
  • MRI_MGH_DATA_OFFSET [var] in MRILIB — Fixed byte offset where image data begins (bytes 0-283 are header).
  • MRI_MGH_HEADER_FIXED_SIZE [var] in MRILIB — Size of the fixed portion of the header (before RAS info).
  • MRI_MGH_VERSION [var] in MRILIB — Current MGH file format version.
  • MRI_NO_FRAMES [var] in MRILIB — Do not load data at all.
  • MRI_SHORT [var] in MRILIB — Signed 16-bit short.
  • MRI_TENSOR [var] in MRILIB — Tensor (unused in practice).
  • MRI_UCHAR [var] in MRILIB — Unsigned char (8-bit).
  • operator!= [fn] in FIFFLIB — Compares two FiffTime instances for inequality.
  • operator<< [fn] in FIFFLIB
  • operator<< [fn] in FIFFLIB
  • operator<< [fn] in FIFFLIB
  • operator<< [fn] in MNELIB
  • operator<< [fn] in MNELIB
  • operator== [fn] in FIFFLIB
  • operator== [fn] in FIFFLIB
  • operator== [fn] in FIFFLIB
  • operator== [fn] in FIFFLIB
  • operator== [fn] in FIFFLIB
  • operator== [fn] in FIFFLIB
  • operator== [fn] in FIFFLIB — Compares two FiffTime instances for equality.
  • operator== [fn] in MNELIB
  • operator== [fn] in MNELIB
  • operator== [fn] in MNELIB
  • operator== [fn] in MNELIB
  • peakFinder [fn] in UTILSLIB — Find peaks in a 1D signal.
  • peakProminences [fn] in UTILSLIB — Compute prominence of each peak.
  • performIcp [fn] in MNELIB — The ICP algorithm to register a point cloud with a surface.
  • PickKind [enum] in DISP3DLIB — Kind of object that produced a 3-D pick.
  • PointKind [enum] in UTILSLIB — Logical category of a captured point.
  • PythonLineCallback [type] in UTILSLIB — Line-level callback signature.
  • PythonProgressCallback [type] in UTILSLIB — Progress callback signature.
  • resolve_stream [fn] in LSLLIB — Resolve streams by a specific property value.
  • resolve_streams [fn] in LSLLIB — Resolve all streams currently available on the network.
  • RowVectorPair [type] in DISPLIB
  • SceneLayerKind [enum] in DISP3DLIB — Modality of a layer in the multimodal scene.
  • sensorParentToKeyPrefix [fn] in SURFACEKEYS — Map a parent-item display text (e.g.
  • sensorTypeToObjectKey [fn] in SURFACEKEYS — Map from user-facing sensor type name (e.g.
  • setBipolarReference [fn] in UTILSLIB — Create bipolar derivations from EEG channels.
  • setEegReference [fn] in UTILSLIB — Re-reference EEG channels to average, specific channel(s), or REST.
  • simulateEvoked [fn] in UTILSLIB — Simulate evoked data from a source estimate and forward model.
  • simulateEvokedNoiseless [fn] in UTILSLIB — Simulate evoked data without noise.
  • simulateStc [fn] in UTILSLIB — Create a synthetic source time course.
  • simulateStcFromWaveforms [fn] in UTILSLIB — Create a synthetic source time course from custom waveforms.
  • SliceOrientation [enum] in DISP3DLIB — Orientation for an orthogonal MRI slice.
  • SliceOrientation [enum] in MRILIB — Slice orientation for orthogonal MRI volume slicing.
  • StatsCorrection [enum] in STSLIB — Multiple comparison correction method.
  • StatsTailType [enum] in STSLIB — Tail type for statistical tests.
  • StimArtifactMode [enum] in UTILSLIB — Mode for stimulus artifact repair.
  • swap_doublep [fn] in FIFFLIB — Swap a 64-bit double in place.
  • swap_float [fn] in FIFFLIB — Swap a 32-bit float.
  • swap_floatp [fn] in FIFFLIB — Swap a 32-bit float in place.
  • swap_int [fn] in FIFFLIB — Swap a 32-bit integer.
  • swap_intp [fn] in FIFFLIB — Swap a 32-bit integer in place.
  • swap_long [fn] in FIFFLIB — Swap a 64-bit long.
  • swap_longp [fn] in FIFFLIB — Swap a 64-bit long in place.
  • swap_short [fn] in FIFFLIB — Swap a 16-bit short.
  • timeNowNow [fn] in UTILSLIB — Returns build time (time preprocessor was run).
  • toEventMatrix [fn] in RTPROCESSINGLIB — Transforms QMap with stored information about events per stim channel to a list of event matrices.
  • tokenIds [fn] in INVLIB — Extract just the integer token IDs from a token sequence (discarding continuous values).
  • tokenize [fn] in INVLIB — Serialise an InvSourceEstimate into a flat token sequence.
  • tokenValues [fn] in INVLIB — Extract just the continuous values from a token sequence (discarding IDs).
  • toQMatrix4x4 [fn] in SURFACEKEYS — Convert an Eigen 4x4 matrix to a QMatrix4x4.
  • vecDefaultWeights [var] in MNELIB