Definition of the MNE Meas Data (MneMeasData) Class. More...

#include "mne_meas_data.h"
#include "mne_meas_data_set.h"
#include "mne_inverse_operator.h"
#include <mne/c/mne_types.h>
#include <mne/c/mne_named_matrix.h>
#include <fiff/fiff_types.h>
#include <time.h>
#include <QFile>

Include dependency graph for mne_meas_data.cpp:

Go to the source code of this file.

Classes
struct	INVERSELIB::ringBufBuf_9

struct	INVERSELIB::ringBuf_9

Macros
#define	TRUE 1

#define	FALSE 0

#define	FAIL -1

#define	OK 0

#define	MIN(a, b) ((a) < (b) ? (a) : (b))

#define	MAX(a, b) ((a) > (b) ? (a) : (b))

#define	MALLOC_9(x, t) (t )malloc((x)sizeof(t))

#define	REALLOC_9(x, y, t) (t )((x == NULL) ? malloc((y)sizeof(t)) : realloc((x),(y)*sizeof(t)))

#define	FREE_9(x) if ((char )(x) != NULL) free((char )(x))

#define	ALLOC_CMATRIX_9(x, y) mne_cmatrix_9((x),(y))

#define	FREE_CMATRIX_9(m) mne_free_cmatrix_9((m))

#define	MAXDATE 100

#define	MAXBUF 200

Typedefs
typedef struct INVERSELIB::ringBufBuf_9	INVERSELIB::ringBufBufRec_9

typedef struct INVERSELIB::ringBuf_9	INVERSELIB::ringBufRec_9

Functions
void	fromFloatEigenMatrix_9 (const Eigen::MatrixXf &from_mat, float **&to_mat, const int m, const int n)

void	fromFloatEigenMatrix_9 (const Eigen::MatrixXf &from_mat, float **&to_mat)

void	mne_free_cmatrix_9 (float **m)

float **	mne_cmatrix_9 (int nr, int nc)

void	mne_free_ring_buffer_9 (void *thisp)

void	mne_free_event_9 (mneEvent e)

void	mne_free_event_list_9 (mneEventList list)

void	mne_free_sparse_named_matrix_9 (mneSparseNamedMatrix mat)

void	mne_ch_selection_free_9 (mneChSelection s)

void	mne_string_to_name_list_9 (const QString &s, QStringList &listp, int &nlistp)

QString	mne_name_list_to_string_9 (const QStringList &list)

QString	mne_channel_names_to_string_9 (const QList< FIFFLIB::FiffChInfo > &chs, int nch)

void	mne_channel_names_to_name_list_9 (const QList< FIFFLIB::FiffChInfo > &chs, int nch, QStringList &listp, int &nlistp)

int	mne_find_evoked_types_comments (FiffStream::SPtr &stream, QList< FiffDirNode::SPtr > &nodesp, int *aspect_typesp, QStringList commentsp)

QList< FiffDirNode::SPtr >	mne_find_evoked (FiffStream::SPtr &stream, QStringList *commentsp)

int	mne_read_evoked (const QString &name, int setno, int nchanp, int nsampp, float tminp, float sfreqp, QList< FiffChInfo > &chsp, float **epochsp, QString commentp, float highpassp, float lowpassp, int navep, int aspect_kindp, FiffCoordTransOld *transp, fiffId idp, fiffTime *meas_datep)

char *	mne_format_file_id (fiffId id)

int	mne_read_meg_comp_eeg_ch_info_9 (const QString &name, QList< FiffChInfo > &megp, int nmegp, QList< FiffChInfo > &meg_compp, int nmeg_compp, QList< FiffChInfo > &eegp, int neegp, FiffCoordTransOld meg_head_t, fiffId idp)

int	mne_read_bad_channel_list_from_node_9 (FiffStream::SPtr &stream, const FiffDirNode::SPtr &pNode, QStringList &listp, int &nlistp)

int	mne_read_bad_channel_list_9 (const QString &name, QStringList &listp, int &nlistp)

Detailed Description

Definition of the MNE Meas Data (MneMeasData) Class.

Author: Lorenz Esch lesch.nosp@m.@mgh.nosp@m..harv.nosp@m.ard..nosp@m.edu; Matti Hamalainen msh@n.nosp@m.mr.m.nosp@m.gh.ha.nosp@m.rvar.nosp@m.d.edu; Christoph Dinh chdin.nosp@m.h@nm.nosp@m.r.mgh.nosp@m..har.nosp@m.vard..nosp@m.edu

Since: 0.1.0

Date: January, 2017

LICENSE

Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.
Neither the name of MNE-CPP authors nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission.

THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Definition in file mne_meas_data.cpp.

Macro Definition Documentation

◆ ALLOC_CMATRIX_9

#define ALLOC_CMATRIX_9	(	x,
		y
	)	mne_cmatrix_9((x),(y))

Definition at line 94 of file mne_meas_data.cpp.

◆ FAIL

#define FAIL -1

Definition at line 72 of file mne_meas_data.cpp.

◆ FALSE

#define FALSE 0

Definition at line 68 of file mne_meas_data.cpp.

◆ FREE_9

#define FREE_9 ( x ) if ((char *)(x) != NULL) free((char *)(x))

Definition at line 92 of file mne_meas_data.cpp.

◆ FREE_CMATRIX_9

#define FREE_CMATRIX_9 ( m ) mne_free_cmatrix_9((m))

Definition at line 96 of file mne_meas_data.cpp.

◆ MALLOC_9

#define MALLOC_9	(	x,
		t
	)	(t )malloc((x)sizeof(t))

Definition at line 89 of file mne_meas_data.cpp.

◆ MAX

#define MAX	(	a,
		b
	)	((a) > (b) ? (a) : (b))

Definition at line 87 of file mne_meas_data.cpp.

◆ MAXBUF

#define MAXBUF 200

Definition at line 1282 of file mne_meas_data.cpp.

◆ MAXDATE

#define MAXDATE 100

Definition at line 344 of file mne_meas_data.cpp.

◆ MIN

#define MIN	(	a,
		b
	)	((a) < (b) ? (a) : (b))

Definition at line 86 of file mne_meas_data.cpp.

◆ OK

#define OK 0

Definition at line 76 of file mne_meas_data.cpp.

◆ REALLOC_9

#define REALLOC_9	(	x,
		y,
		t
	)	(t )((x == NULL) ? malloc((y)sizeof(t)) : realloc((x),(y)*sizeof(t)))

Definition at line 90 of file mne_meas_data.cpp.

◆ TRUE

#define TRUE 1

Definition at line 64 of file mne_meas_data.cpp.

Function Documentation

◆ fromFloatEigenMatrix_9() [1/2]

void fromFloatEigenMatrix_9	(	const Eigen::MatrixXf &	from_mat,
		float **&	to_mat
	)

Definition at line 105 of file mne_meas_data.cpp.

◆ fromFloatEigenMatrix_9() [2/2]

void fromFloatEigenMatrix_9	(	const Eigen::MatrixXf &	from_mat,
		float **&	to_mat,
		const int	m,
		const int	n
	)

Definition at line 98 of file mne_meas_data.cpp.

◆ mne_ch_selection_free_9()

void mne_ch_selection_free_9 ( mneChSelection s )

Definition at line 226 of file mne_meas_data.cpp.

◆ mne_channel_names_to_name_list_9()

void mne_channel_names_to_name_list_9	(	const QList< FIFFLIB::FiffChInfo > &	chs,
		int	nch,
		QStringList &	listp,
		int &	nlistp
	)

Definition at line 292 of file mne_meas_data.cpp.

◆ mne_channel_names_to_string_9()

QString mne_channel_names_to_string_9	(	const QList< FIFFLIB::FiffChInfo > &	chs,
		int	nch
	)

Definition at line 276 of file mne_meas_data.cpp.

◆ mne_cmatrix_9()

float ** mne_cmatrix_9	(	int	nr,
		int	nc
	)

Definition at line 135 of file mne_meas_data.cpp.

◆ mne_find_evoked()

QList< FiffDirNode::SPtr > mne_find_evoked	(	FiffStream::SPtr &	stream,
		QStringList *	commentsp
	)

Definition at line 1047 of file mne_meas_data.cpp.

◆ mne_find_evoked_types_comments()

int mne_find_evoked_types_comments	(	FiffStream::SPtr &	stream,
		QList< FiffDirNode::SPtr > &	nodesp,
		int **	aspect_typesp,
		QStringList *	commentsp
	)

Definition at line 961 of file mne_meas_data.cpp.

◆ mne_format_file_id()

char * mne_format_file_id ( fiffId id )

Definition at line 1284 of file mne_meas_data.cpp.

◆ mne_free_cmatrix_9()

void mne_free_cmatrix_9 ( float ** m )

Definition at line 110 of file mne_meas_data.cpp.

◆ mne_free_event_9()

void mne_free_event_9 ( mneEvent e )

Definition at line 187 of file mne_meas_data.cpp.

◆ mne_free_event_list_9()

void mne_free_event_list_9 ( mneEventList list )

Definition at line 196 of file mne_meas_data.cpp.

◆ mne_free_ring_buffer_9()

void mne_free_ring_buffer_9 ( void * thisp )

Definition at line 169 of file mne_meas_data.cpp.

◆ mne_free_sparse_named_matrix_9()

void mne_free_sparse_named_matrix_9 ( mneSparseNamedMatrix mat )

Definition at line 209 of file mne_meas_data.cpp.

◆ mne_name_list_to_string_9()

QString mne_name_list_to_string_9 ( const QStringList & list )

Definition at line 258 of file mne_meas_data.cpp.

◆ mne_read_bad_channel_list_9()

int mne_read_bad_channel_list_9	(	const QString &	name,
		QStringList &	listp,
		int &	nlistp
	)

Definition at line 1493 of file mne_meas_data.cpp.

◆ mne_read_bad_channel_list_from_node_9()

int mne_read_bad_channel_list_from_node_9	(	FiffStream::SPtr &	stream,
		const FiffDirNode::SPtr &	pNode,
		QStringList &	listp,
		int &	nlistp
	)

Definition at line 1463 of file mne_meas_data.cpp.

◆ mne_read_evoked()

int mne_read_evoked	(	const QString &	name,
		int	setno,
		int *	nchanp,
		int *	nsampp,
		float *	tminp,
		float *	sfreqp,
		QList< FiffChInfo > &	chsp,
		float ***	epochsp,
		QString *	commentp,
		float *	highpassp,
		float *	lowpassp,
		int *	navep,
		int *	aspect_kindp,
		FiffCoordTransOld **	transp,
		fiffId *	idp,
		fiffTime *	meas_datep
	)

Definition at line 1101 of file mne_meas_data.cpp.

◆ mne_read_meg_comp_eeg_ch_info_9()

int mne_read_meg_comp_eeg_ch_info_9	(	const QString &	name,
		QList< FiffChInfo > &	megp,
		int *	nmegp,
		QList< FiffChInfo > &	meg_compp,
		int *	nmeg_compp,
		QList< FiffChInfo > &	eegp,
		int *	neegp,
		FiffCoordTransOld **	meg_head_t,
		fiffId *	idp
	)

Definition at line 1300 of file mne_meas_data.cpp.

◆ mne_string_to_name_list_9()

void mne_string_to_name_list_9	(	const QString &	s,
		QStringList &	listp,
		int &	nlistp
	)

Definition at line 242 of file mne_meas_data.cpp.

Classes

Macros

Typedefs

Functions