FSLIB::FsColortable Class Reference

FreeSurfer colour lookup table: region name + RGBA + packed label, indexed by entry. More...

#include <fs_colortable.h>

Public Types
typedef QSharedPointer< FsColortable >	SPtr
typedef QSharedPointer< const FsColortable >	ConstSPtr

Public Member Functions
	FsColortable ()
void	clear ()
Eigen::VectorXi	getLabelIds () const
QStringList	getNames () const
Eigen::MatrixX4i	getRGBAs () const

Public Attributes
QString	orig_tab
qint32	numEntries
QStringList	struct_names
Eigen::MatrixXi	table

Detailed Description

FreeSurfer colour lookup table: region name + RGBA + packed label, indexed by entry.

Backs the colour/structure mapping used by FsAnnotation and by any caller that needs to translate a packed .annot label into the matching anatomical name and RGBA colour. The container is a thin value object: rows of table align with struct_names, and the label column matches the per-vertex integer stored in .annot files so direct equality lookup is sufficient.

Definition at line 71 of file fs_colortable.h.

Member Typedef Documentation

ConstSPtr

typedef QSharedPointer<const FsColortable> FSLIB::FsColortable::ConstSPtr

Const shared pointer type for FsColortable.

Definition at line 75 of file fs_colortable.h.

SPtr

typedef QSharedPointer<FsColortable> FSLIB::FsColortable::SPtr

Shared pointer type for FsColortable.

Definition at line 74 of file fs_colortable.h.

Constructor & Destructor Documentation

FsColortable()

FsColortable::FsColortable ( )

explicit

Default constructor.

Definition at line 30 of file fs_colortable.cpp.

Member Function Documentation

clear()

void FsColortable::clear

(

)

Initializes colortable.

Definition at line 38 of file fs_colortable.cpp.

getLabelIds()

Eigen::VectorXi FSLIB::FsColortable::getLabelIds ( ) const

inline

Ids encoded in the colortable

Returns

ids.

Definition at line 124 of file fs_colortable.h.

getNames()

QStringList FSLIB::FsColortable::getNames ( ) const

inline

Names encoded in the colortable

Returns

ids.

Definition at line 135 of file fs_colortable.h.

getRGBAs()

Eigen::MatrixX4i FSLIB::FsColortable::getRGBAs ( ) const

inline

RGBAs encoded in the colortable

Returns

RGBAs.

Definition at line 142 of file fs_colortable.h.

Member Data Documentation

numEntries

qint32 FSLIB::FsColortable::numEntries

Number of entries.

Definition at line 115 of file fs_colortable.h.

orig_tab

QString FSLIB::FsColortable::orig_tab

FsColortable raw data.

Definition at line 114 of file fs_colortable.h.

struct_names

QStringList FSLIB::FsColortable::struct_names

Anatomical ROI description.

Definition at line 116 of file fs_colortable.h.

table

Eigen::MatrixXi FSLIB::FsColortable::table

labels and corresponing colorcode.

Definition at line 117 of file fs_colortable.h.

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The documentation for this class was generated from the following files:

• src/libraries/fs/fs_colortable.h
• src/libraries/fs/fs_colortable.cpp