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MNEHemisphere

Namespace: MNELIB  ·  Library: MNE Library

#include <mne/mne_hemisphere.h>

class MNELIB::MNEHemisphere

Hemisphere source space geometry information.

Hemisphere provides geometry information

src/examples/ex_mne_api/main.cpp
QFile srcFile(data + "/subjects/sample/bem/sample-oct-6-src.fif");
FiffStream::SPtr stream(new FiffStream(&srcFile));
MNESourceSpaces src;
stream->open();
MNESourceSpaces::readFromStream(stream, true, src); // add_geom: normals, triangle data and patches
stream->close();
const auto& lh = dynamic_cast<const MNEHemisphere&>(src[0]);
QList<VectorXi> vertno = src.get_vertno(); // used vertices per hemisphere

Inheritance​

Public Methods​

MNEHemisphere()​

Constructors the hemisphere source space.

MNEHemisphere(p_MNEHemisphere)​

Copy constructor.

Parameters:

  • p_MNEHemisphere : const MNEHemisphere & Hemisphere source space which should be copied.

~MNEHemisphere()​

Destroys the hemisphere source space.

clone()​

Creates a deep copy of this hemisphere, preserving the MNEHemisphere type.

Returns:

add_geometry_info()​

Add vertex normals and neighbourhood information to this hemisphere.

Returns:

  • bool — true if succeeded, false otherwise.

complete_source_space_info()​

Complete triangulation information (triangle centers, normals, areas) for both the main and use triangulations.

Returns:

  • bool — true if succeeded, false otherwise.

compute_patch_info()​

Compute patch statistics from the nearest-vertex data.

Fills pinfo (per-patch vertex lists) and patch_inds (patch index per vertex).

Returns:

  • bool — true if patch info was computed, false if nearest data is empty.

clear()​

Initializes the hemisphere source space.

isClustered()​

is hemisphere clustered?

Returns:

  • bool — true if hemisphere is clustered, false otherwise.

transform_hemisphere_to(dest, p_Trans)​

mne_transform_source_space_to

Parameters:

  • dest : FIFFLIB::fiff_int_t The id of the destination coordinate system (FIFFV_COORD_...).

  • p_Trans : const FiffCoordTrans & The coordinate transformation structure to use.

Returns:

  • bool — true if succeeded, false otherwise.

writeToStream(p_pStream)​

mne_python _write_one_source_space

Parameters:

  • p_pStream : *FiffStream ** The stream to write to.

operator=(other)​

Copy assignment operator.

Parameters:

Returns:

Example​

Used in examples​

ex_mne_api​

MNE library: BEM surfaces, surface projection, ICP, source spaces and epochs.

src/examples/ex_mne_api/main.cpp, line 200
stream->open();
MNESourceSpaces::readFromStream(stream, true, src); // add_geom: normals, triangle data and patches
stream->close();
const auto& lh = dynamic_cast<const MNEHemisphere&>(src[0]);
QList<VectorXi> vertno = src.get_vertno(); // used vertices per hemisphere
// mne.read_source_spaces: lh 155407 vertices, 4098 in use (8192 used triangles), vertno 14, 54, 59; rh 156866 / 4098
ok &= expect(src.size() == 2 && lh.np == 155407 && lh.nuse == 4098 && lh.nuse_tri == 8192 && lh.coord_frame == FIFFV_COORD_MRI && vertno[0].head(3) == Vector3i(14, 54, 59) && src[1].np == 156866 && vertno[1].size() == 4098 && lh.pinfo.size() == 4098,
             "MNESourceSpaces/MNEHemisphere: oct-6 source space with patches like mne.read_source_spaces");

Authors of this file​