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phaselagindex.h
Go to the documentation of this file.
1//=============================================================================================================
39
40#ifndef PHASELAGINDEX_H
41#define PHASELAGINDEX_H
42
43//=============================================================================================================
44// INCLUDES
45//=============================================================================================================
46
48
49#include "abstractmetric.h"
51
52//=============================================================================================================
53// QT INCLUDES
54//=============================================================================================================
55
56#include <QSharedPointer>
57#include <QMutex>
58
59//=============================================================================================================
60// EIGEN INCLUDES
61//=============================================================================================================
62
63#include <Eigen/Core>
64
65//=============================================================================================================
66// FORWARD DECLARATIONS
67//=============================================================================================================
68
69//=============================================================================================================
70// DEFINE NAMESPACE CONNECTIVITYLIB
71//=============================================================================================================
72
73namespace CONNECTIVITYLIB {
74
75//=============================================================================================================
76// CONNECTIVITYLIB FORWARD DECLARATIONS
77//=============================================================================================================
78
79class Network;
80
81//=============================================================================================================
95{
96
97public:
98 typedef QSharedPointer<PhaseLagIndex> SPtr;
99 typedef QSharedPointer<const PhaseLagIndex> ConstSPtr;
100
101 //=========================================================================================================
105 explicit PhaseLagIndex();
106
107 //=========================================================================================================
115 static Network calculate(ConnectivitySettings& connectivitySettings);
116
117protected:
118 //=========================================================================================================
132 QVector<QPair<int,Eigen::MatrixXcd> >& vecPairCsdSum,
133 QVector<QPair<int,Eigen::MatrixXd> >& vecPairCsdImagSignSum,
134 QMutex& mutex,
135 int iNRows,
136 int iNFreqs,
137 int iNfft,
138 const QPair<Eigen::MatrixXd, Eigen::VectorXd>& tapers);
139
140 //=========================================================================================================
147 static void computePLI(ConnectivitySettings &connectivitySettings,
148 Network& finalNetwork);
149};
150
151//=============================================================================================================
152// INLINE DEFINITIONS
153//=============================================================================================================
154} // namespace CONNECTIVITYLIB
155
156#endif // PHASELAGINDEX_H
Common static knobs shared by every functional-connectivity estimator in CONNECTIVITYLIB.
Export/import macros for the CONNECTIVITYLIB functional-connectivity library.
#define CONNECTIVITYSHARED_EXPORT
Input-data and parameter container shared by every functional-connectivity metric in CONNECTIVITYLIB.
Functional connectivity metrics (coherence, PLV, cross-correlation, etc.).
Aggregates trial data, spectral cache and node geometry shared by all CONNECTIVITYLIB metrics.
Per-trial intermediate frequency-domain data used during connectivity computation.
static Network calculate(ConnectivitySettings &connectivitySettings)
static void compute(ConnectivitySettings::IntermediateTrialData &inputData, QVector< QPair< int, Eigen::MatrixXcd > > &vecPairCsdSum, QVector< QPair< int, Eigen::MatrixXd > > &vecPairCsdImagSignSum, QMutex &mutex, int iNRows, int iNFreqs, int iNfft, const QPair< Eigen::MatrixXd, Eigen::VectorXd > &tapers)
static void computePLI(ConnectivitySettings &connectivitySettings, Network &finalNetwork)
QSharedPointer< PhaseLagIndex > SPtr
QSharedPointer< const PhaseLagIndex > ConstSPtr
Graph container for one connectivity metric; nodes + weighted edges + threshold/visualisation state.
Definition network.h:98