MNELIB::MNEBemSurface Class Reference

BEM surface provides geometry information. More...

#include <mne_bem_surface.h>

Public Types
typedef QSharedPointer< MNEBemSurface >	SPtr
typedef QSharedPointer< const MNEBemSurface >	ConstSPtr

Public Member Functions
	MNEBemSurface ()
	MNEBemSurface (const MNEBemSurface &p_MNEBemSurface)
	~MNEBemSurface ()
void	clear ()
bool	addTriangleData ()
bool	add_geometry_info ()
bool	addVertexNormals ()
void	writeToStream (FIFFLIB::FiffStream *p_pStream)

Static Public Member Functions
static QString	id_name (int id)

Public Attributes
FIFFLIB::fiff_int_t	id
FIFFLIB::fiff_int_t	np
FIFFLIB::fiff_int_t	ntri
FIFFLIB::fiff_int_t	coord_frame
FIFFLIB::fiff_float_t	sigma
Eigen::MatrixX3f	rr
Eigen::MatrixX3f	nn
Eigen::MatrixX3i	tris
Eigen::MatrixX3d	tri_cent
Eigen::MatrixX3d	tri_nn
Eigen::VectorXd	tri_area
QVector< QVector< int > >	neighbor_tri
QVector< QVector< int > >	neighbor_vert

Detailed Description

BEM surface provides geometry information.

BEM surface geometry information

Definition at line 79 of file mne_bem_surface.h.

Member Typedef Documentation

ConstSPtr

typedef QSharedPointer<const MNEBemSurface> MNELIB::MNEBemSurface::ConstSPtr

Const shared pointer type for MNEBemSurface.

Definition at line 83 of file mne_bem_surface.h.

SPtr

typedef QSharedPointer<MNEBemSurface> MNELIB::MNEBemSurface::SPtr

Shared pointer type for MNEBemSurface.

Definition at line 82 of file mne_bem_surface.h.

Constructor & Destructor Documentation

MNEBemSurface() [1/2]

MNEBemSurface::MNEBemSurface

(

)

Constructors the bem surface.

Definition at line 56 of file mne_bem_surface.cpp.

MNEBemSurface() [2/2]

MNEBemSurface::MNEBemSurface

(

const MNEBemSurface &

p_MNEBemSurface

)

Copy constructor.

Parameters

[in]

p_MNEBemSurface

BEM surface which should be copied.

Definition at line 73 of file mne_bem_surface.cpp.

~MNEBemSurface()

MNEBemSurface::~MNEBemSurface

(

)

Destroys the BEM surface.

Definition at line 93 of file mne_bem_surface.cpp.

Member Function Documentation

add_geometry_info()

bool MNEBemSurface::add_geometry_info

(

)

Add vertex normals and neighbourhood information

Returns

true if succeeded, false otherwise.

Definition at line 179 of file mne_bem_surface.cpp.

addTriangleData()

bool MNEBemSurface::addTriangleData

(

)

Definition of the mne_add_triangle_data function in mne_add_geometry_info.c

Completes triangulation info

Returns

true if succeeded, false otherwise.

Definition at line 116 of file mne_bem_surface.cpp.

addVertexNormals()

bool MNEBemSurface::addVertexNormals

(

)

Definition of the addVertexNormals function in mne_add_geometry_info.c

Completes triangulation info

Returns

true if succeeded, false otherwise.

Definition at line 226 of file mne_bem_surface.cpp.

clear()

void MNEBemSurface::clear

(

)

Initializes the BEM surface.

Definition at line 99 of file mne_bem_surface.cpp.

id_name()

QString MNEBemSurface::id_name ( int  id )

static

Map bem id integers to human-readable names

Parameters

[in]

frame

The bem id integer.

Returns

Human readable form of the bem id.

Definition at line 279 of file mne_bem_surface.cpp.

writeToStream()

void MNEBemSurface::writeToStream

(

FIFFLIB::FiffStream *

p_pStream

)

Writes the bem surface to a FIFF stream

Parameters

[in]

p_pStream

The stream to write to.

Definition at line 261 of file mne_bem_surface.cpp.

Member Data Documentation

coord_frame

FIFFLIB::fiff_int_t MNELIB::MNEBemSurface::coord_frame

Coil coordinate system definition.

Definition at line 161 of file mne_bem_surface.h.

id

FIFFLIB::fiff_int_t MNELIB::MNEBemSurface::id

Id information.

Definition at line 158 of file mne_bem_surface.h.

neighbor_tri

QVector<QVector<int> > MNELIB::MNEBemSurface::neighbor_tri

Vector of neighboring triangles for each vertex.

Definition at line 169 of file mne_bem_surface.h.

neighbor_vert

QVector<QVector<int> > MNELIB::MNEBemSurface::neighbor_vert

Vector of neighboring vertices for each vertex.

Definition at line 170 of file mne_bem_surface.h.

nn

Eigen::MatrixX3f MNELIB::MNEBemSurface::nn

Source normals of available dipoles.

Definition at line 164 of file mne_bem_surface.h.

np

FIFFLIB::fiff_int_t MNELIB::MNEBemSurface::np

Number of vertices of the whole/original surface used to create the source locations.

Definition at line 159 of file mne_bem_surface.h.

ntri

FIFFLIB::fiff_int_t MNELIB::MNEBemSurface::ntri

Number of available triangles.

Definition at line 160 of file mne_bem_surface.h.

rr

Eigen::MatrixX3f MNELIB::MNEBemSurface::rr

Source locations of available dipoles.

Definition at line 163 of file mne_bem_surface.h.

sigma

FIFFLIB::fiff_float_t MNELIB::MNEBemSurface::sigma

Conductivity of a compartment.

Definition at line 162 of file mne_bem_surface.h.

tri_area

Eigen::VectorXd MNELIB::MNEBemSurface::tri_area

Triangle areas.

Definition at line 168 of file mne_bem_surface.h.

tri_cent

Eigen::MatrixX3d MNELIB::MNEBemSurface::tri_cent

Triangle centers.

Definition at line 166 of file mne_bem_surface.h.

tri_nn

Eigen::MatrixX3d MNELIB::MNEBemSurface::tri_nn

Triangle normals.

Definition at line 167 of file mne_bem_surface.h.

tris

Eigen::MatrixX3i MNELIB::MNEBemSurface::tris

Triangles.

Definition at line 165 of file mne_bem_surface.h.

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The documentation for this class was generated from the following files:

• src/libraries/mne/mne_bem_surface.h
• src/libraries/mne/mne_bem_surface.cpp