| doc | |
| doxygen | |
| src | |
| libraries | |
| bids | |
| readers | |
| bids_abstract_format_reader.h | Contains the declaration of the AbstractFormatReader class |
| bids_brain_vision_reader.cpp | Definition of the BrainVisionReader class |
| bids_brain_vision_reader.h | Contains the declaration of the BrainVisionReader class |
| bids_edf_reader.cpp | Definition of the EDFReader class |
| bids_edf_reader.h | Contains the declaration of the EDFReader class. Refactored from the mne_edf2fiff tool into a reusable library reader |
| bids_channel.cpp | BidsChannel struct definition — *_channels.tsv I/O |
| bids_channel.h | BidsChannel struct — channel metadata from *_channels.tsv |
| bids_const.h | BIDS constants, channel type mappings, and allowed values |
| bids_coordinate_system.cpp | BidsCoordinateSystem struct definition — *_coordsystem.json I/O |
| bids_coordinate_system.h | BidsCoordinateSystem struct — iEEG coordinate system from *_coordsystem.json |
| bids_dataset_description.cpp | BidsDatasetDescription struct definition — dataset_description.json I/O |
| bids_dataset_description.h | BidsDatasetDescription struct — dataset_description.json I/O |
| bids_electrode.cpp | BidsElectrode struct definition — *_electrodes.tsv I/O |
| bids_electrode.h | BidsElectrode struct — electrode position from *_electrodes.tsv |
| bids_event.cpp | BidsEvent struct definition — *_events.tsv I/O |
| bids_event.h | BidsEvent struct declaration — a single BIDS event annotation |
| bids_global.cpp | Bids library export/import macros |
| bids_global.h | Bids library export/import macros |
| bids_path.cpp | BIDSPath class definition |
| bids_path.h | BIDSPath class declaration — BIDS-compliant path construction and entity management |
| bids_raw_data.cpp | BidsRawData class definition — read(), write(), clear(), and createReader() |
| bids_raw_data.h | BidsRawData class declaration — central container for a BIDS raw dataset with integrated read/write capabilities and sidecar metadata |
| bids_tsv.cpp | BidsTsv class definition — generic TSV I/O |
| bids_tsv.h | BidsTsv class declaration — generic BIDS TSV file reading and writing |
| com | |
| rt_client | |
| rt_client.cpp | |
| rt_client.h | |
| rt_cmd_client.cpp | |
| rt_cmd_client.h | |
| rt_data_client.cpp | |
| rt_data_client.h | |
| rt_command | |
| command.cpp | |
| command.h | Declaration of the Command Class |
| command_manager.cpp | |
| command_manager.h | |
| command_parser.cpp | |
| command_parser.h | |
| raw_command.cpp | |
| raw_command.h | |
| com_global.cpp | |
| com_global.h | |
| conn | |
| metrics | |
| abstractmetric.cpp | AbstractMetric class definition |
| abstractmetric.h | AbstractMetric class declaration |
| coherence.cpp | Coherence class declaration |
| coherence.h | Coherence class declaration |
| coherency.cpp | Coherency class declaration |
| coherency.h | Coherency class declaration |
| correlation.cpp | Correlation class definition |
| correlation.h | Correlation class declaration |
| crosscorrelation.cpp | CrossCorrelation class definition |
| crosscorrelation.h | CrossCorrelation class declaration |
| debiasedsquaredweightedphaselagindex.cpp | DebiasedSquaredWeightedPhaseLagIndex class definition |
| debiasedsquaredweightedphaselagindex.h | DebiasedSquaredWeightedPhaseLagIndex class declaration |
| imagcoherence.cpp | Imaginary coherence class declaration |
| imagcoherence.h | Imaginary coherence class declaration |
| phaselagindex.cpp | PhaseLagIndex class definition |
| phaselagindex.h | PhaseLagIndex class declaration |
| phaselockingvalue.cpp | PhaseLockingValue class definition |
| phaselockingvalue.h | PhaseLockingValue class declaration |
| unbiasedsquaredphaselagindex.cpp | UnbiasedSquaredPhaseLagIndex class definition |
| unbiasedsquaredphaselagindex.h | UnbiasedSquaredPhaseLagIndex class declaration |
| weightedphaselagindex.cpp | WeightedPhaseLagIndex class definition |
| weightedphaselagindex.h | WeightedPhaseLagIndex class declaration |
| network | |
| network.cpp | Network class definition |
| network.h | Network class declaration |
| networkedge.cpp | NetworkEdge class definition |
| networkedge.h | NetworkEdge class declaration |
| networknode.cpp | NetworkNode class definition |
| networknode.h | NetworkNode class declaration |
| conn_global.cpp | Conn library export/import macros |
| conn_global.h | Conn library export/import macros |
| connectivity.cpp | Connectivity class definition |
| connectivity.h | Connectivity class declaration |
| connectivitysettings.cpp | ConnectivitySettings class definition |
| connectivitysettings.h | ConnectivitySettings class declaration |
| disp | |
| plots | |
| helpers | |
| colormap.cpp | Definition of the ColorMap class |
| colormap.h | ColorMap class declaration |
| bar.cpp | Bar class definition |
| bar.h | Bar class declaration |
| graph.cpp | Definition of the Graph class |
| graph.h | Graph class declaration |
| imagesc.cpp | Definition of the ImageSc class |
| imagesc.h | ImageSc class declaration |
| lineplot.cpp | LinePlot class implementation |
| lineplot.h | LinePlot class declaration |
| plot.cpp | Definition of the Plot class |
| plot.h | Plot class declaration |
| spline.cpp | Definition of spline class |
| spline.h | Spline class declaration |
| tfplot.cpp | TFplot class definition |
| tfplot.h | TFplot class declaration |
| viewers | |
| helpers | |
| averagescene.cpp | Definition of the AverageScene class |
| averagescene.h | Contains the declaration of the AverageScene class |
| averagesceneitem.cpp | Definition of the AverageSceneItem class |
| averagesceneitem.h | Contains the declaration of the AverageSceneItem class |
| bidsviewmodel.cpp | Definition of the BidsViewModel Class |
| bidsviewmodel.h | Contains declaration of BidsViewModel Container class |
| channelinfomodel.cpp | The definition for ChannelInfoModel |
| channelinfomodel.h | The declaration for ChannelInfoModel. |
| draggableframelesswidget.cpp | Definition of the DraggableFramelessWidget Class |
| draggableframelesswidget.h | Declaration of the DraggableFramelessWidget Class |
| evokedsetmodel.cpp | Definition of the EvokedSetModel Class |
| evokedsetmodel.h | Declaration of the EvokedSetModel Class |
| filterplotscene.cpp | Definition of the FilterPlotScene class |
| filterplotscene.h | Contains the declaration of the FilterPlotScene class |
| frequencyspectrumdelegate.cpp | Definition of the FrequencySpectrumDelegate Class |
| frequencyspectrumdelegate.h | Declaration of the FrequencySpectrumDelegate Class |
| frequencyspectrummodel.cpp | Definition of the FrequencySpectrumModel Class |
| frequencyspectrummodel.h | Declaration of the FrequencySpectrumModel Class |
| layoutscene.cpp | Definition of the LayoutScene class |
| layoutscene.h | Contains the declaration of the LayoutScene class |
| mneoperator.cpp | Definition of the MNEOperator Class |
| mneoperator.h | Declaration of the MNEOperator Class |
| rtfiffrawviewdelegate.cpp | Definition of the RtFiffRawViewDelegate Class |
| rtfiffrawviewdelegate.h | Declaration of the RtFiffRawViewDelegate Class |
| rtfiffrawviewmodel.cpp | Definition of the RtFiffRawViewModel Class |
| rtfiffrawviewmodel.h | Declaration of the RtFiffRawViewModel Class |
| scalecontrol.cpp | Definition of the ScaleControl Class |
| scalecontrol.h | Declaration of the ScaleControl Class |
| selectionscene.cpp | Definition of the SelectionScene class |
| selectionscene.h | Contains the declaration of the SelectionScene class |
| selectionsceneitem.cpp | Definition of the SelectionSceneItem class |
| selectionsceneitem.h | Contains the declaration of the SelectionSceneItem class |
| abstractview.cpp | Definition of the AbstractView Class |
| abstractview.h | Declaration of the AbstractView Class |
| applytoview.cpp | Definition of the ApplyToView Class |
| applytoview.h | Declaration of the ApplyToView Class |
| artifactsettingsview.cpp | Definition of the ArtifactSettingsView class |
| artifactsettingsview.h | Declaration of the ArtifactSettingsView class |
| averagelayoutview.cpp | Definition of the AverageLayoutView Class |
| averagelayoutview.h | Declaration of the AverageLayoutView Class |
| averageselectionview.cpp | Definition of the AverageSelectionView Class |
| averageselectionview.h | Declaration of the AverageSelectionView Class |
| averagingsettingsview.cpp | Definition of the AveragingSettingsView class |
| averagingsettingsview.h | Contains the declaration of the AveragingSettingsView class |
| bidsview.cpp | Contains the declaration of the BidsView class |
| bidsview.h | Contains the declaration of the BidsView class |
| butterflyview.cpp | Definition of the ButterflyView class |
| butterflyview.h | Declaration of the ButterflyView class |
| channelselectionview.cpp | Definition of the ChannelSelectionView class |
| channelselectionview.h | Contains the declaration of the ChannelSelectionView class |
| compensatorview.cpp | Definition of the CompensatorView Class |
| compensatorview.h | Declaration of the CompensatorView Class |
| connectivitysettingsview.cpp | Definition of the ConnectivitySettingsView Class |
| connectivitysettingsview.h | Declaration of the ConnectivitySettingsView Class |
| control3dview.cpp | Definition of the Control3DView Class |
| control3dview.h | Control3DView class declaration |
| coregsettingsview.cpp | CoregSettingsView class definition |
| coregsettingsview.h | CoregSettingsView class declaration |
| covariancesettingsview.cpp | Definition of the CovarianceSettingsView class |
| covariancesettingsview.h | Contains the declaration of the CovarianceSettingsView class |
| dipolefitview.cpp | Definition of the DipoleFitView Class |
| dipolefitview.h | Declaration of the DipoleFitView Class |
| fiffrawviewsettings.cpp | Definition of the FiffRawViewSettings Class |
| fiffrawviewsettings.h | Declaration of the FiffRawViewSettings Class |
| filterdesignview.cpp | Definition of the FilterDesignView class |
| filterdesignview.h | Contains the declaration of the FilterDesignView class |
| filtersettingsview.cpp | Definition of the FilterSettingsView Class |
| filtersettingsview.h | Declaration of the FilterSettingsView Class |
| fwdsettingsview.cpp | FwdSettingsView class definition |
| fwdsettingsview.h | FwdSettingsView class declaration |
| hpisettingsview.cpp | HpiSettingsView class definition |
| hpisettingsview.h | HpiSettingsView class declaration |
| minimumnormsettingsview.cpp | Definition of the MinimumNormSettingsView Class |
| minimumnormsettingsview.h | Declaration of the MinimumNormSettingsView Class |
| modalityselectionview.cpp | Definition of the ModalitySelectionView Class |
| modalityselectionview.h | Declaration of the ModalitySelectionView Class |
| multiview.cpp | MultiView class definition |
| multiview.h | MultiView class declaration |
| multiviewwindow.cpp | MultiViewWindow class declaration |
| multiviewwindow.h | MultiViewWindow class declaration |
| progressview.cpp | Definition of the ProgressView class |
| progressview.h | Declaration of the ProgressView Class |
| projectorsview.cpp | Definition of the ProjectorsView Class |
| projectorsview.h | Declaration of the ProjectorsView Class |
| projectsettingsview.cpp | Definition of the ProjectSettingsView Class |
| projectsettingsview.h | Declaration of the ProjectSettingsView Class |
| quickcontrolview.cpp | Definition of the QuickControlView Class |
| quickcontrolview.h | Declaration of the QuickControlView Class |
| rtfiffrawview.cpp | Definition of the RtFiffRawView Class |
| rtfiffrawview.h | Declaration of the RtFiffRawView Class |
| scalingview.cpp | Definition of the ScalingView Class |
| scalingview.h | Declaration of the ScalingView Class |
| spectrumsettingsview.cpp | Definition of the SpectrumSettingsView Class |
| spectrumsettingsview.h | Declaration of the SpectrumSettingsView Class |
| spectrumview.cpp | Definition of the SpectrumView Class |
| spectrumview.h | Declaration of the SpectrumView Class |
| spharasettingsview.cpp | Definition of the SpharaSettingsView Class |
| spharasettingsview.h | Declaration of the SpharaSettingsView Class |
| tfsettingsview.cpp | Definition of the TfSettingsView Class |
| tfsettingsview.h | Declaration of the TfSettingsView Class |
| triggerdetectionview.cpp | Definition of the TriggerDetectionView Class |
| triggerdetectionview.h | Declaration of the TriggerDetectionView Class |
| disp_global.cpp | Disp library export/import macros |
| disp_global.h | Disp library export/import macros |
| disp3D | |
| core | |
| dataloader.cpp | DataLoader implementation |
| dataloader.h | DataLoader — static helpers for loading MNE data files |
| rendertypes.h | Lightweight render-related enums shared across the disp3D library |
| surfacekeys.h | FsSurface key constants and type-to-key mappings |
| viewstate.cpp | ViewState implementations — per-view data structures and helpers |
| viewstate.h | ViewState declarations — per-view data structures and conversion helpers |
| geometry | |
| meshfactory.cpp | MeshFactory class implementation |
| meshfactory.h | MeshFactory class declaration — static utilities for generating primitive meshes (spheres, plates, barbells, batched point clouds) |
| helpers | |
| field_map.h | Forwarding header – field mapping moved to fwd library |
| geometryinfo.cpp | GeometryInfo class definition |
| geometryinfo.h | GeometryInfo class declaration |
| interpolation.cpp | Interpolation class definition |
| interpolation.h | Interpolation class declaration |
| input | |
| cameracontroller.cpp | CameraController class implementation |
| cameracontroller.h | CameraController class declaration |
| raypicker.cpp | RayPicker class implementation |
| raypicker.h | RayPicker class declaration — ray casting and intersection testing |
| model | |
| items | |
| abstracttreeitem.cpp | AbstractTreeItem class definition |
| abstracttreeitem.h | AbstractTreeItem class declaration |
| bemtreeitem.cpp | BemTreeItem class definition |
| bemtreeitem.h | BemTreeItem class declaration |
| digitizersettreeitem.cpp | DigitizerSetTreeItem class implementation |
| digitizersettreeitem.h | DigitizerSetTreeItem class declaration |
| digitizertreeitem.cpp | DigitizerTreeItem class implementation |
| digitizertreeitem.h | DigitizerTreeItem class declaration |
| dipoletreeitem.cpp | DipoleTreeItem class definition |
| dipoletreeitem.h | DipoleTreeItem class declaration |
| networktreeitem.cpp | NetworkTreeItem class definition |
| networktreeitem.h | NetworkTreeItem class declaration |
| sensortreeitem.cpp | SensorTreeItem class definition |
| sensortreeitem.h | SensorTreeItem class declaration |
| sourcespacetreeitem.cpp | SourceSpaceTreeItem class implementation |
| sourcespacetreeitem.h | SourceSpaceTreeItem class declaration |
| surfacetreeitem.cpp | SurfaceTreeItem class definition |
| surfacetreeitem.h | SurfaceTreeItem class declaration |
| braintreemodel.cpp | BrainTreeModel class definition |
| braintreemodel.h | BrainTreeModel class declaration |
| renderable | |
| brainsurface.cpp | BrainSurface class definition |
| brainsurface.h | BrainSurface class declaration |
| dipoleobject.cpp | DipoleObject class definition |
| dipoleobject.h | DipoleObject class declaration |
| networkobject.cpp | NetworkObject class definition |
| networkobject.h | NetworkObject class declaration |
| sourceestimateoverlay.cpp | SourceEstimateOverlay class definition |
| sourceestimateoverlay.h | SourceEstimateOverlay class declaration |
| scene | |
| rtsensorstreammanager.cpp | RtSensorStreamManager class definition |
| rtsensorstreammanager.h | RtSensorStreamManager class declaration — real-time sensor data streaming |
| sensorfieldmapper.cpp | SensorFieldMapper class implementation |
| sensorfieldmapper.h | SensorFieldMapper class declaration |
| sourceestimatemanager.cpp | SourceEstimateManager class definition |
| sourceestimatemanager.h | SourceEstimateManager class declaration — owns STC overlay, loading, and real-time streaming |
| view | |
| brainrenderer.cpp | BrainRenderer class definition |
| brainrenderer.h | BrainRenderer class declaration |
| brainview.cpp | BrainView class definition |
| brainview.h | BrainView class declaration |
| multiviewlayout.cpp | MultiViewLayout class implementation |
| multiviewlayout.h | MultiViewLayout class declaration — viewport geometry and splitter logic |
| workers | |
| rtsensordatacontroller.cpp | RtSensorDataController class definition |
| rtsensordatacontroller.h | RtSensorDataController class declaration |
| rtsensordataworker.cpp | RtSensorDataWorker class definition |
| rtsensordataworker.h | RtSensorDataWorker class declaration |
| rtsensorinterpolationmatworker.cpp | RtSensorInterpolationMatWorker class definition |
| rtsensorinterpolationmatworker.h | RtSensorInterpolationMatWorker class declaration |
| rtsourcedatacontroller.cpp | RtSourceDataController class definition |
| rtsourcedatacontroller.h | RtSourceDataController class declaration |
| rtsourcedataworker.cpp | RtSourceDataWorker class definition |
| rtsourcedataworker.h | RtSourceDataWorker class declaration |
| rtsourceinterpolationmatworker.cpp | RtSourceInterpolationMatWorker class definition |
| rtsourceinterpolationmatworker.h | RtSourceInterpolationMatWorker class declaration |
| stcloadingworker.cpp | StcLoadingWorker class definition |
| stcloadingworker.h | StcLoadingWorker class declaration |
| disp3D_global.cpp | Disp3D library build info implementation |
| disp3D_global.h | Disp3D library export/import macros |
| dsp | |
| rt | |
| rt_averaging.cpp | |
| rt_averaging.h | |
| rt_connectivity.cpp | |
| rt_connectivity.h | |
| rt_cov.cpp | |
| rt_cov.h | |
| rt_detect_trigger.cpp | |
| rt_detect_trigger.h | |
| rt_filter.cpp | |
| rt_filter.h | |
| rt_hpis.cpp | |
| rt_hpis.h | |
| rt_inv_op.cpp | |
| rt_inv_op.h | |
| rt_noise.cpp | |
| rt_noise.h | |
| artifact_detect.cpp | Implementation of ArtifactDetect |
| artifact_detect.h | Declaration of ArtifactDetect — ECG and EOG physiological artifact event detection |
| bad_channel_detect.cpp | Implementation of BadChannelDetect |
| bad_channel_detect.h | Declaration of BadChannelDetect — automated detection of bad MEG/EEG channels |
| cosinefilter.cpp | Definition of the CosineFilter class |
| cosinefilter.h | Declaration of the CosineFilter class |
| dsp_global.cpp | Dsp library global functions |
| dsp_global.h | Dsp library export/import macros |
| epoch_extractor.cpp | Implementation of EpochExtractor |
| epoch_extractor.h | Declaration of EpochExtractor — segments continuous MEG/EEG data into trials |
| filterio.cpp | Definition of the FilterIO class |
| filterio.h | FilterIO class declaration |
| filterkernel.cpp | Contains all FilterKernel |
| filterkernel.h | The FilterKernel class represents a filter object that generates the FIR filter coefficients using Park's McClellan's filter design algorithm [1] and offers a overlap-add method [2] for frequency filtering of an input sequence. In this regard, the filter coefficients of a certain filter order are zero-padded to fill a length of an multiple integer of a power of 2 in order to efficiently compute a FFT. The length of the FFT is given by the next power of 2 of the length of the input sequence. In order to avoid circular-convolution, the input sequence is given by the FFT-length-NumFilterTaps |
| firfilter.cpp | Implementation of FirFilter |
| firfilter.h | Declaration of FirFilter — a discoverable façade over the existing FilterKernel FIR API |
| ica.cpp | Implementation of the ICA class |
| ica.h | Declaration of the ICA class providing FastICA-based independent component analysis for artifact removal in MEG/EEG data |
| iirfilter.cpp | Implementation of IirFilter |
| iirfilter.h | Declaration of IirFilter — Butterworth IIR filter design and application using numerically stable second-order sections (SOS / biquad cascade) |
| parksmcclellan.cpp | |
| parksmcclellan.h | |
| resample.cpp | Implementation of Resample |
| resample.h | Declaration of Resample — polyphase anti-aliased rational resampling for MEG/EEG data |
| spectrogram.cpp | Definition of spectrogram class |
| spectrogram.h | Declaration of spectrogram class |
| sphara.cpp | Definition of the Sphara class |
| sphara.h | Declaration of SPHARA projector construction |
| sss.cpp | Implementation of the SSS class |
| sss.h | Declaration of the SSS class implementing Signal Space Separation (SSS) and temporal Signal Space Separation (tSSS) for MEG data |
| fiff | |
| fiff.cpp | Definition of the FIFF Wrapper Class |
| fiff.h | FIFF class declaration, which provides static wrapper functions to stay consistent with mne matlab toolbox - Note: avoid using the wrappers, prefer the wrapped methods! Its sufficient to include this header to have access to all Fiff classes |
| fiff_byte_swap.h | Byte-swap utility functions for FIFF binary I/O |
| fiff_ch_info.cpp | Definition of the FiffChInfo Class |
| fiff_ch_info.h | FiffChInfo class declaration |
| fiff_ch_pos.cpp | Definition of the FiffChPos Class |
| fiff_ch_pos.h | FiffChPos class declaration |
| fiff_constants.h | Fiff constants |
| fiff_coord_trans.cpp | Definition of the FiffCoordTrans Class |
| fiff_coord_trans.h | FiffCoordTrans class declaration |
| fiff_coord_trans_set.cpp | Definition of the FiffCoordTransSet Class |
| fiff_coord_trans_set.h | FiffCoordTransSet class declaration |
| fiff_cov.cpp | Definition of the FiffCov Class |
| fiff_cov.h | FiffCov class declaration |
| fiff_ctf_comp.cpp | Definition of the FiffCtfComp Class |
| fiff_ctf_comp.h | FiffCtfComp class declaration |
| fiff_data_ref.h | FiffDataRef class declaration |
| fiff_dig_point.cpp | Definition of the FiffDigPoint Class |
| fiff_dig_point.h | FiffDigPoint class declaration |
| fiff_dig_point_set.cpp | Fiff_dig_point_set class definition |
| fiff_dig_point_set.h | FiffDigPointSet class declaration |
| fiff_digitizer_data.cpp | Definition of the FiffDigitizerData Class |
| fiff_digitizer_data.h | FiffDigitizerData class declaration |
| fiff_dir_entry.cpp | Definition of the FiffDirEntry Class |
| fiff_dir_entry.h | FiffDirEntry class declaration |
| fiff_dir_node.cpp | Definition of the FiffDirNode Class |
| fiff_dir_node.h | FiffDirNode class declaration, which provides fiff dir tree processing methods |
| fiff_events.cpp | Definition of the FiffEvents Class |
| fiff_events.h | FiffEvents class declaration |
| fiff_evoked.cpp | Definition of the FIFFEvoked Class |
| fiff_evoked.h | FiffEvoked class declaration |
| fiff_evoked_set.cpp | Definition of the FiffEvokedSet Class |
| fiff_evoked_set.h | FiffEvokedSet class declaration |
| fiff_explain.h | Fiff block and dir tag explainations |
| fiff_file.h | Header file describing the numerical values used in fif files |
| fiff_file_sharer.cpp | FiffFileSharer class definition |
| fiff_file_sharer.h | FiffFileSharer class declaration |
| fiff_global.cpp | Fiff library export/import macros |
| fiff_global.h | Fiff library export/import macros |
| fiff_id.cpp | Definition of the FiffId Class |
| fiff_id.h | FiffId class declaration |
| fiff_info.cpp | Definition of the FiffInfo Class |
| fiff_info.h | FiffInfo class declaration |
| fiff_info_base.cpp | Definition of the FiffInfoBase Class |
| fiff_info_base.h | FiffInfoBase class declaration |
| fiff_io.cpp | Definition of a generic Fiff IO interface |
| fiff_io.h | Definition of a generic Fiff IO interface |
| fiff_named_matrix.cpp | Definition of the FiffNamedMatrix Class |
| fiff_named_matrix.h | FiffNamedMatrix class declaration |
| fiff_proj.cpp | Definition of the FiffProj Class |
| fiff_proj.h | FiffProj class declaration |
| fiff_raw_data.cpp | Definition of the FiffRawData Class |
| fiff_raw_data.h | FiffRawData class declaration |
| fiff_raw_dir.cpp | Definition of the FiffRawDir Class |
| fiff_raw_dir.h | FiffRawDir class declaration |
| fiff_sparse_matrix.cpp | Definition of the FiffSparseMatrix Class |
| fiff_sparse_matrix.h | FiffSparseMatrix class declaration |
| fiff_stream.cpp | Definition of the FiffStream Class |
| fiff_stream.h | FiffStream class declaration |
| fiff_tag.cpp | Definition of the FiffTag Class |
| fiff_tag.h | FiffTag class declaration, which provides fiff tag I/O and processing methods |
| fiff_time.h | FiffTime class declaration |
| fiff_types.h | Old fiff_type declarations - replace them |
| fs | |
| fs_annotation.cpp | Definition of the FsAnnotation class |
| fs_annotation.h | FsAnnotation class declaration |
| fs_annotationset.cpp | FsAnnotationSet class implementation |
| fs_annotationset.h | FsAnnotationSet class declaration |
| fs_colortable.cpp | Definition of the FsColortable Class |
| fs_colortable.h | FsColortable class declaration |
| fs_global.cpp | |
| fs_global.h | Fs library export/import macros |
| fs_label.cpp | Definition of the FsLabel class |
| fs_label.h | FsLabel class declaration |
| fs_surface.cpp | Definition of the FsSurface class |
| fs_surface.h | FsSurface class declaration |
| fs_surfaceset.cpp | Definition of the FsSurfaceSet class |
| fs_surfaceset.h | FsSurfaceSet class declaration |
| fwd | |
| compute_fwd | |
| compute_fwd.cpp | ComputeFwd class definition |
| compute_fwd.h | ComputeFwd class declaration |
| compute_fwd_settings.cpp | ComputeFwdSettings class definition |
| compute_fwd_settings.h | ComputeFwdSettings class declaration |
| fwd.h | Fwd class declaration, which provides static wrapper functions for the forward library |
| fwd_bem_model.cpp | Definition of the FwdBemModel Class |
| fwd_bem_model.h | FwdBemModel class declaration |
| fwd_bem_solution.cpp | Definition of the FwdBemSolution Class |
| fwd_bem_solution.h | FwdBemSolution class declaration |
| fwd_coil.cpp | Definition of the FwdCoil Class |
| fwd_coil.h | FwdCoil class declaration |
| fwd_coil_set.cpp | Definition of the FwdCoilSet Class |
| fwd_coil_set.h | FwdCoilSet class declaration |
| fwd_comp_data.cpp | Definition of the FwdCompData Class |
| fwd_comp_data.h | FwdCompData class declaration |
| fwd_eeg_sphere_layer.cpp | Definition of the FwdEegSphereLayer Class |
| fwd_eeg_sphere_layer.h | FwdEegSphereLayer class declaration |
| fwd_eeg_sphere_model.cpp | Definition of the FwdEegSphereModel Class |
| fwd_eeg_sphere_model.h | FwdEegSphereModel class declaration |
| fwd_eeg_sphere_model_set.cpp | Definition of the FwdEegSphereModelSet Class |
| fwd_eeg_sphere_model_set.h | FwdEegSphereModelSet class declaration |
| fwd_field_map.cpp | Sphere-model field mapping |
| fwd_field_map.h | FwdFieldMap class declaration |
| fwd_global.cpp | Forward library export/import macros |
| fwd_global.h | Forward library export/import macros |
| fwd_thread_arg.cpp | FwdThreadArg class definition |
| fwd_thread_arg.h | FwdThreadArg class declaration |
| fwd_types.h | Forward library type definitions |
| inv | |
| beamformer | |
| inv_beamformer.cpp | Definition of the InvBeamformer class |
| inv_beamformer.h | InvBeamformer class declaration — stores computed beamformer spatial filters |
| inv_beamformer_compute.cpp | Definition of the InvBeamformerCompute class |
| inv_beamformer_compute.h | Shared beamformer computation routines for LCMV and DICS |
| inv_beamformer_settings.h | Beamformer settings and enumerations |
| inv_dics.cpp | Definition of the InvDICS class |
| inv_dics.h | InvDICS class declaration — Dynamic Imaging of Coherent Sources beamformer |
| inv_lcmv.cpp | Definition of the InvLCMV class |
| inv_lcmv.h | InvLCMV class declaration — Linearly Constrained Minimum Variance beamformer |
| dipole_fit | |
| inv_dipole_fit.cpp | Definition of the InvDipoleFit class |
| inv_dipole_fit.h | Dipole Fit class declaration |
| inv_dipole_fit_data.cpp | Definition of the InvDipoleFitData class |
| inv_dipole_fit_data.h | Dipole Fit Data class declaration |
| inv_dipole_fit_settings.cpp | |
| inv_dipole_fit_settings.h | Dipole Fit Setting class declaration |
| inv_dipole_forward.cpp | Definition of the InvDipoleForward Class |
| inv_dipole_forward.h | InvDipoleForward class declaration |
| inv_ecd.cpp | Definition of the Electric Current Dipole (InvEcd) Class |
| inv_ecd.h | Electric Current Dipole (InvEcd) class declaration |
| inv_ecd_set.cpp | Definition of the Electric Current Dipole Set (InvEcdSet) Class |
| inv_ecd_set.h | FiffDigPointSet class declaration |
| inv_guess_data.cpp | Definition of the InvGuessData Class |
| inv_guess_data.h | InvGuessData class declaration |
| hpi | |
| inv_hpi_data_updater.cpp | InvHpiDataUpdater class definition |
| inv_hpi_data_updater.h | InvHpiDataUpdater class declaration |
| inv_hpi_fit.cpp | InvHpiFit class defintion |
| inv_hpi_fit.h | InvHpiFit class declaration |
| inv_hpi_fit_data.cpp | InvHpiFitData class defintion |
| inv_hpi_fit_data.h | InvHpiFitData class declaration |
| inv_hpi_model_parameters.cpp | InvHpiModelParameters class definition |
| inv_hpi_model_parameters.h | InvHpiModelParameters class declaration |
| inv_sensor_set.cpp | InvSensorSet class definition |
| inv_sensor_set.h | InvSensorSet class declaration |
| inv_signal_model.cpp | SignalModel class definition |
| inv_signal_model.h | InvSignalModel class declaration |
| minimum_norm | |
| inv_minimum_norm.cpp | Definition of the InvMinimumNorm Class |
| inv_minimum_norm.h | Minimum norm class declaration |
| rap_music | |
| inv_dipole.cpp | ToDo Documentation.. |
| inv_dipole.h | InvDipole class declaration for RAP MUSIC dipole results |
| inv_pwl_rap_music.cpp | Definition of the InvPwlRapMusic Algorithm Class |
| inv_pwl_rap_music.h | InvPwlRapMusic algorithm class declaration |
| inv_rap_music.cpp | Definition of the InvRapMusic Algorithm Class |
| inv_rap_music.h | InvRapMusic algorithm class declaration |
| inv_connectivity.h | InvConnectivity struct for pairwise source connectivity results |
| inv_focal_dipole.h | InvFocalDipole struct declaration for off-grid dipole results (e.g. ECD dipole fit) |
| inv_global.cpp | Inverse library export/import macros |
| inv_global.h | Inverse library export/import macros |
| inv_source_coupling.cpp | InvSourceCoupling struct definition |
| inv_source_coupling.h | InvSourceCoupling struct declaration for correlated source groups (e.g. RAP-MUSIC dipole tuples) |
| inv_source_estimate.cpp | Definition of the SourceEstimate Class |
| inv_source_estimate.h | InvSourceEstimate class declaration |
| inv_source_estimate_token.cpp | Tokenization and de-tokenization of InvSourceEstimate for foundation-model interfacing |
| inv_source_estimate_token.h | Tokenization and de-tokenization of InvSourceEstimate for foundation-model interfacing |
| inv_token.h | Token vocabulary and structures for foundation-model tokenization of InvSourceEstimate |
| inv_types.h | Inverse library type enumerations |
| lsl | |
| lsl.h | Main include header for the MNE-CPP LSL library |
| lsl_global.cpp | Lsl library global definitions |
| lsl_global.h | Lsl library export/import macros |
| lsl_stream_discovery.cpp | Contains the definition of stream discovery functions |
| lsl_stream_discovery.h | Contains the declaration of stream discovery functions |
| lsl_stream_info.cpp | Contains the definition of the stream_info class |
| lsl_stream_info.h | Contains the declaration of the stream_info class |
| lsl_stream_inlet.cpp | Contains the definition of the stream_inlet class |
| lsl_stream_inlet.h | Contains the declaration of the stream_inlet class |
| lsl_stream_outlet.cpp | Contains the definition of the stream_outlet class |
| lsl_stream_outlet.h | Contains the declaration of the stream_outlet class |
| math | |
| kmeans.cpp | Definition of the KMeans class |
| kmeans.h | KMeans class declaration |
| linalg.cpp | Definition of the Linalg class |
| linalg.h | Linalg class declaration |
| math_global.cpp | Math library global functions |
| math_global.h | Math library export/import macros |
| numerics.cpp | Definition of the Numerics class |
| numerics.h | Numerics class declaration |
| simplex_algorithm.h | SimplexAlgorithm Template Implementation |
| spectral.cpp | Declaration of Spectral class |
| spectral.h | Declaration of Spectral class |
| sphere.cpp | Definition of the Sphere Class |
| sphere.h | Sphere class declaration |
| warp.cpp | Warp class definition |
| warp.h | Warp class declaration |
| mne | |
| filter_thread_arg.cpp | Definition of the MNE Derivation (MNEDeriv) Class |
| filter_thread_arg.h | Filter Thread Argument (FilterThreadArg) class declaration |
| mne.cpp | Definition of the MNE Wrapper Class |
| mne.h | MNE class declaration, which provides static wrapper functions to stay consistent with mne matlab toolbox |
| mne_bem.cpp | MNEBem class implementation |
| mne_bem.h | MNEBem class declaration |
| mne_bem_surface.cpp | MNEBemSurface class implementation |
| mne_bem_surface.h | MNEBemSurface class declaration |
| mne_ch_selection.h | |
| mne_cluster_info.cpp | MNEClusterInfo class implementation |
| mne_cluster_info.h | MNEClusterInfo class declaration, which provides cluster information |
| mne_cov_matrix.cpp | Definition of the MNECovMatrix Class |
| mne_cov_matrix.h | MNECovMatrix class declaration |
| mne_ctf_comp_data.cpp | Definition of the MNECTFCompData Class |
| mne_ctf_comp_data.h | MNECTFCompData class declaration |
| mne_ctf_comp_data_set.cpp | Definition of the MNECTFCompDataSet Class |
| mne_ctf_comp_data_set.h | MNECTFCompDataSet class declaration |
| mne_deriv.cpp | Definition of the MNE Derivation (MNEDeriv) Class |
| mne_deriv.h | MNE Derivation (MNEDeriv) class declaration |
| mne_deriv_set.cpp | Definition of the MNE Derivation Set (MNEDerivSet) Class |
| mne_deriv_set.h | MNE Derivation Set (MNEDerivSet) class declaration |
| mne_description_parser.cpp | MNEDescriptionParser implementation. Ported from interpret.c by Matti Hamalainen |
| mne_description_parser.h | MNEDescriptionParser class declaration. Parses MNE-C style .ave and .cov description files. Ported from interpret.c by Matti Hamalainen |
| mne_epoch_data.cpp | Definition of the MNEEpochData Class |
| mne_epoch_data.h | MNEEpochData class declaration |
| mne_epoch_data_list.cpp | Definition of the MNEEpochDataList Class |
| mne_epoch_data_list.h | MNEEpochDataList class declaration |
| mne_event.h | |
| mne_event_list.h | |
| mne_filter_def.h | |
| mne_forward_solution.cpp | MNEForwardSolution class definition |
| mne_forward_solution.h | MNEForwardSolution class declaration |
| mne_global.cpp | Mne library export/import macros |
| mne_global.h | Mne library export/import macros |
| mne_hemisphere.cpp | MNEHemisphere class implementation |
| mne_hemisphere.h | MNEHemisphere class declaration |
| mne_icp.cpp | ICP class definition |
| mne_icp.h | ICP declarations |
| mne_inverse_operator.cpp | Definition of the MNEInverseOperator Class |
| mne_inverse_operator.h | MNEInverseOperator class declaration |
| mne_layout.h | |
| mne_layout_port.h | |
| mne_meas_data.cpp | Definition of the MNE Meas Data (MNEMeasData) Class |
| mne_meas_data.h | MNEMeasData class declaration |
| mne_meas_data_set.cpp | Definition of the MNE Meas Data Set (MNEMeasDataSet) Class |
| mne_meas_data_set.h | MNEMeasDataSet class declaration |
| mne_mgh_tag.cpp | Definition of the MNEMghTag Class |
| mne_mgh_tag.h | MNEMghTag class declaration |
| mne_mgh_tag_group.cpp | Definition of the MNEMghTagGroup Class |
| mne_mgh_tag_group.h | MNEMghTagGroup class declaration |
| mne_mne_data.cpp | Definition of the MNE Mne Data (MNEMneData) Class |
| mne_mne_data.h | MNE MNE Data (MNEMneData) class declaration |
| mne_morph_map.cpp | Definition of the MNEMorphMap Class |
| mne_morph_map.h | MNEMorphMap class declaration |
| mne_msh_color_scale_def.cpp | Definition of the MNEMshColorScaleDef Class |
| mne_msh_color_scale_def.h | MNEMshColorScaleDef class declaration |
| mne_msh_display_surface.cpp | Definition of the MNEMshDisplaySurface Class |
| mne_msh_display_surface.h | MNEMshDisplaySurface class declaration |
| mne_msh_display_surface_set.cpp | Definition of the MNEMshDisplaySurfaceSet Class |
| mne_msh_display_surface_set.h | MNEMshDisplaySurfaceSet class declaration |
| mne_msh_eyes.cpp | Definition of the MNEMshEyes Class |
| mne_msh_eyes.h | MNEMshEyes class declaration |
| mne_msh_light.cpp | Definition of the MNEMshLight Class |
| mne_msh_light.h | MNEMshLight class declaration |
| mne_msh_light_set.cpp | Definition of the MNEMshLightSet Class |
| mne_msh_light_set.h | MNEMshLightSet class declaration |
| mne_msh_picked.cpp | Definition of the MNEMshPicked Class |
| mne_msh_picked.h | MNEMshPicked class declaration |
| mne_named_matrix.cpp | MNENamedMatrix class definition |
| mne_named_matrix.h | MNENamedMatrix class declaration |
| mne_named_vector.cpp | Definition of the MNENamedVector Class |
| mne_named_vector.h | |
| mne_nearest.cpp | Definition of the MNENearest Class |
| mne_nearest.h | MNENearest class declaration |
| mne_patch_info.cpp | Definition of the MNE Patch Information (MNEPatchInfo) Class |
| mne_patch_info.h | MNE Patch Information (MNEPatchInfo) class declaration |
| mne_process_description.h | Data types for MNE-C style averaging and covariance description files. Ported from MNE-C browser_types.h by Matti Hamalainen |
| mne_proj_data.cpp | Definition of the MNEProjData Class |
| mne_proj_data.h | MNEProjData class declaration |
| mne_proj_item.cpp | MNEProjItem class definition |
| mne_proj_item.h | MNEProjItem class declaration |
| mne_proj_op.cpp | Definition of the MNEProjOp Class |
| mne_proj_op.h | MNEProjOp class declaration |
| mne_project_to_surface.cpp | |
| mne_project_to_surface.h | |
| mne_raw_buf_def.cpp | Definition of the MNERawBufDef Class |
| mne_raw_buf_def.h | MNERawBufDef class declaration |
| mne_raw_data.cpp | Definition of the MNERawData Class |
| mne_raw_data.h | MNERawData class declaration |
| mne_raw_info.cpp | Definition of the MNERawInfo Class |
| mne_raw_info.h | MNERawInfo class declaration |
| mne_source_space.cpp | Definition of the MNESourceSpace Class |
| mne_source_space.h | MNESourceSpace class declaration |
| mne_source_spaces.cpp | MNESourceSpaces class implementation |
| mne_source_spaces.h | MNESourceSpaces class declaration |
| mne_sparse_named_matrix.h | |
| mne_sss_data.cpp | Definition of the MNE SSS Data (MNESssData) Class |
| mne_sss_data.h | MNE SSS Data (MNESssData) class declaration |
| mne_surface.cpp | Definition of the MNESurface Class |
| mne_surface.h | MNESurface class declaration |
| mne_surface_or_volume.cpp | Definition of the MNE FsSurface or Volume (MNESurfaceOrVolume) Class |
| mne_surface_or_volume.h | MNE FsSurface or Volume (MNESurfaceOrVolume) class declaration |
| mne_surface_patch.cpp | Definition of the MNESurfacePatch Class |
| mne_surface_patch.h | MNESurfacePatch class declaration |
| mne_triangle.cpp | Definition of the MNETriangle Class |
| mne_triangle.h | MNETriangle class declaration |
| mne_types.h | Legacy MNE-C constants and common typedefs |
| mne_vol_geom.cpp | Definition of the MNEVolGeom Class |
| mne_vol_geom.h | MNEVolGeom class declaration |
| mri | |
| mri_cor_fif_io.cpp | MriCorFifIO class definition |
| mri_cor_fif_io.h | MriCorFifIO class declaration |
| mri_cor_io.cpp | MriCorIO class definition |
| mri_cor_io.h | MriCorIO class declaration |
| mri_global.cpp | MRI library build information |
| mri_global.h | MRI library export/import macros |
| mri_mgh_io.cpp | MriMghIO class definition |
| mri_mgh_io.h | MriMghIO class declaration |
| mri_types.h | MRI type definitions and constants |
| mri_vol_data.cpp | MriVolData class definition |
| mri_vol_data.h | MriVolData class declaration |
| utils | |
| generics | |
| circularbuffer.h | CircularBuffer class declaration |
| commandpattern.h | Contains declarations of the command design pattern: ICommand interface |
| mne_logger.cpp | Contains the definition of the MNELogger class |
| mne_logger.h | Contains the declaration of the MNELogger class |
| observerpattern.cpp | Contains implementations of the observer design pattern: Subject class and IObserver interface |
| observerpattern.h | Contains declarations of the observer design pattern: Subject class and IObserver interface |
| buildinfo.h | Build information utils |
| ioutils.cpp | Definition of the IOUtils class |
| ioutils.h | IOUtils class declaration |
| layoutloader.cpp | Definition of the LayoutLoader class |
| layoutloader.h | LayoutLoader class declaration |
| layoutmaker.cpp | Definition of the LayoutMaker class |
| layoutmaker.h | LayoutLoader class declaration |
| selectionio.cpp | Definition of the SelectionIO class |
| selectionio.h | SelectionIO class declaration |
| utils_global.cpp | Utils library export/import macros |
| utils_global.h | Utils library export/import macros |