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unbiasedsquaredphaselagindex.h
Go to the documentation of this file.
1//=============================================================================================================
35
36#ifndef UNBIASEDSQUAREDPHASELAGINDEX_H
37#define UNBIASEDSQUAREDPHASELAGINDEX_H
38
39//=============================================================================================================
40// INCLUDES
41//=============================================================================================================
42
44
45#include "abstractmetric.h"
47
48//=============================================================================================================
49// QT INCLUDES
50//=============================================================================================================
51
52#include <QSharedPointer>
53#include <QMutex>
54
55//=============================================================================================================
56// EIGEN INCLUDES
57//=============================================================================================================
58
59#include <Eigen/Core>
60
61//=============================================================================================================
62// FORWARD DECLARATIONS
63//=============================================================================================================
64
65//=============================================================================================================
66// DEFINE NAMESPACE CONNECTIVITYLIB
67//=============================================================================================================
68
69namespace CONNECTIVITYLIB {
70
71//=============================================================================================================
72// CONNECTIVITYLIB FORWARD DECLARATIONS
73//=============================================================================================================
74
75class Network;
76
77//=============================================================================================================
91{
92
93public:
94 typedef QSharedPointer<UnbiasedSquaredPhaseLagIndex> SPtr;
95 typedef QSharedPointer<const UnbiasedSquaredPhaseLagIndex> ConstSPtr;
96
97 //=========================================================================================================
102
103 //=========================================================================================================
111 static Network calculate(ConnectivitySettings& connectivitySettings);
112
113protected:
114 //=========================================================================================================
128 QVector<QPair<int,Eigen::MatrixXcd> >& vecPairCsdSum,
129 QVector<QPair<int,Eigen::MatrixXd> >& vecPairCsdImagSignSum,
130 QMutex& mutex,
131 int iNRows,
132 int iNFreqs,
133 int iNfft,
134 const QPair<Eigen::MatrixXd, Eigen::VectorXd>& tapers);
135
136 //=========================================================================================================
143 static void computeUSPLI(ConnectivitySettings &connectivitySettings,
144 Network& finalNetwork);
145};
146
147//=============================================================================================================
148// INLINE DEFINITIONS
149//=============================================================================================================
150} // namespace CONNECTIVITYLIB
151
152#endif // UNBIASEDSQUAREDPHASELAGINDEX_H
Common static knobs shared by every functional-connectivity estimator in CONNECTIVITYLIB.
Export/import macros for the CONNECTIVITYLIB functional-connectivity library.
#define CONNECTIVITYSHARED_EXPORT
Input-data and parameter container shared by every functional-connectivity metric in CONNECTIVITYLIB.
Functional connectivity metrics (coherence, PLV, cross-correlation, etc.).
Aggregates trial data, spectral cache and node geometry shared by all CONNECTIVITYLIB metrics.
Per-trial intermediate frequency-domain data used during connectivity computation.
QSharedPointer< UnbiasedSquaredPhaseLagIndex > SPtr
static void computeUSPLI(ConnectivitySettings &connectivitySettings, Network &finalNetwork)
static Network calculate(ConnectivitySettings &connectivitySettings)
static void compute(ConnectivitySettings::IntermediateTrialData &inputData, QVector< QPair< int, Eigen::MatrixXcd > > &vecPairCsdSum, QVector< QPair< int, Eigen::MatrixXd > > &vecPairCsdImagSignSum, QMutex &mutex, int iNRows, int iNFreqs, int iNfft, const QPair< Eigen::MatrixXd, Eigen::VectorXd > &tapers)
QSharedPointer< const UnbiasedSquaredPhaseLagIndex > ConstSPtr
Graph container for one connectivity metric; nodes + weighted edges + threshold/visualisation state.
Definition network.h:98