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phaselagindex.h
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1//=============================================================================================================
39
40#ifndef PHASELAGINDEX_H
41#define PHASELAGINDEX_H
42
43//=============================================================================================================
44// INCLUDES
45//=============================================================================================================
46
48
49#include "abstractmetric.h"
51
52//=============================================================================================================
53// QT INCLUDES
54//=============================================================================================================
55
56#include <QSharedPointer>
57#include <QMutex>
58
59//=============================================================================================================
60// EIGEN INCLUDES
61//=============================================================================================================
62
63#include <Eigen/Core>
64
65//=============================================================================================================
66// FORWARD DECLARATIONS
67//=============================================================================================================
68
69//=============================================================================================================
70// DEFINE NAMESPACE CONNECTIVITYLIB
71//=============================================================================================================
72
73namespace CONNECTIVITYLIB
74{
75
76//=============================================================================================================
77// CONNECTIVITYLIB FORWARD DECLARATIONS
78//=============================================================================================================
79
80class Network;
81
82//=============================================================================================================
98{
99public:
100 typedef QSharedPointer<PhaseLagIndex> SPtr;
101 typedef QSharedPointer<const PhaseLagIndex> ConstSPtr;
102
103 //=========================================================================================================
107 explicit PhaseLagIndex();
108
109 //=========================================================================================================
117 static Network calculate(ConnectivitySettings& connectivitySettings);
118
119protected:
120 //=========================================================================================================
134 QVector<QPair<int, Eigen::MatrixXcd>>& vecPairCsdSum,
135 QVector<QPair<int, Eigen::MatrixXd>>& vecPairCsdImagSignSum,
136 QMutex& mutex,
137 int iNRows,
138 int iNFreqs,
139 int iNfft,
140 const QPair<Eigen::MatrixXd, Eigen::VectorXd>& tapers);
141
142 //=========================================================================================================
149 static void computePLI(ConnectivitySettings& connectivitySettings,
150 Network& finalNetwork);
151};
152
153//=============================================================================================================
154// INLINE DEFINITIONS
155//=============================================================================================================
156} // namespace CONNECTIVITYLIB
157
158#endif // PHASELAGINDEX_H
Export/import macros for the CONNECTIVITYLIB functional-connectivity library.
#define CONNECTIVITYSHARED_EXPORT
Input-data and parameter container shared by every functional-connectivity metric in CONNECTIVITYLIB.
Common static knobs shared by every functional-connectivity estimator in CONNECTIVITYLIB.
Functional connectivity metrics (coherence, PLV, cross-correlation, etc.).
Aggregates trial data, spectral cache and node geometry shared by all CONNECTIVITYLIB metrics.
Per-trial intermediate frequency-domain data used during connectivity computation.
static Network calculate(ConnectivitySettings &connectivitySettings)
static void compute(ConnectivitySettings::IntermediateTrialData &inputData, QVector< QPair< int, Eigen::MatrixXcd > > &vecPairCsdSum, QVector< QPair< int, Eigen::MatrixXd > > &vecPairCsdImagSignSum, QMutex &mutex, int iNRows, int iNFreqs, int iNfft, const QPair< Eigen::MatrixXd, Eigen::VectorXd > &tapers)
static void computePLI(ConnectivitySettings &connectivitySettings, Network &finalNetwork)
QSharedPointer< PhaseLagIndex > SPtr
QSharedPointer< const PhaseLagIndex > ConstSPtr
Graph container for one connectivity metric; nodes + weighted edges + threshold/visualisation state.
Definition network.h:106